Don't display N=X per category in the header

[stefanie-hennig]

Hi, Is there a way to not to display the number of data points contributing to the summary for a category using Table1?

Current code is:

rndr <- function(x, name, ...){
  
  f <- function(x){
    if (is.na(x) || is.nan(x)) "NC"
    else
      signif_pad(x, 3)
  }
  
  Med  = median(x, na.rm = T)
  Min  = min(x, na.rm = T)
  Max  = max(x, na.rm = T)
  N = length(na.omit(x))
  
  MPI  = paste0(f(Med), " [", f(Min), " - ", f(Max), "]", " (",f(N),")") 
  Tmp <- switch(name,
                
               X   = c("Median [Min - Max] (N)" = MPI),
               Y = c("Median [Min - Max] (N)" = MPI)
                
  )
  
  parse.abbrev.render.code(c("", Tmp))(x)
  
}

dat <- read.table(header=T, sep="|", na.strings=".", strip.white=T, text="
ID | TYPE | QQ | X    | Y
1  | aa   | 1  | 0.13 | .
1  | aa   | 2  | .    | 1.2
1  | bb   | 4  | 1.8  | .
1  | bb   | 2  | .    | 0.9
2  | aa   | 1  | 0.17 | .
2  | aa   | 2  | .    | 2.1
2  | cc   | 1  | 33   | .
2  | cc   | 1  | .    | 54
")


zebra = "Rtable1-zebra Rtable1-shade Rtable1-times"


tab1 = table1( ~ X + Y | TYPE*QQ,
               data = dat, 
               overall = F, render = rndr, 
               caption = "", topclass = zebra, 
               rowlabelhead = "")

tab1

[benjaminrich]

Yes, it's possible. It might not be the most elegant code, but if you pass this argument inside the function call you should get what you want:

render.strat = function(label, ...) sprintf("<span class='stratlabel'>%s</span>", label),

I need to think about a nicer way of integrating this functionality.

[stefanie-hennig]

Thanks so much for the quick response. It's one of the best packages! I am using it every day. Cheers