RewriteContainerPlugins should hit all modules, not just those that have inject types

[benjamin-bader]

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[benjamin-bader]

This is still an issue, and is made harder to resolve after confining codegen to the main assembly.

Fixing this requires valid codegen for all assemblies, which in turn requires a fix to Mono.Cecil.TypeReference.Resolve() with Portable Assemblies. Blocked until Cecil's issue 123 is resolved.