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Handle missing LN fields in @SQ headers

Open bede opened this issue 8 years ago • 1 comments

Accept reference as an optional argument and use to calculate length in absense of LN field

Throw exception with missing LN field and no reference

bede avatar Aug 22 '17 12:08 bede

Would probably make sense to infer from a user-supplied reference rather than work this put directly from bam

See https://github.com/bede/kindel/issues/13

bede avatar Aug 21 '19 11:08 bede