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The CMS is a multiscale stochastic Lagrangian framework developed by Paris' Lab at the Rosenstiel School of Marine, Atmospheric & Earth Science to study complex behaviors, giving probabilistic estimat...

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Let the user define the name of the mld variable on nest.nml

enhancement

Need to include conditional clauses to avoid getphysicaldata to create and operate mld at each input time step.

enhancement

I believe the current code in mod_reef.f90 doesn't account for any polygons that cross the GMT meridian. I have tried multiple formats of coordinates but if you have a box...

bug

Hello, As you mentioned in the model guide, I attempted to run the CMS model experimentally without modifying any files. I executed the following commands: ./getdata getdata_example 1 which downloaded...

After reading the input data in releaseFile, CMS forces the input longitude to be in the [0, 360] range. https://github.com/beatrixparis/connectivity-modeling-system/blob/fb491389261e895379f9f1bc943e46d66ab59684/cms-master/src/input.f90#L291-L297 However, the input data may be, say, in [-180, 180]...

question

Number of snapshots in file is determined by inquiring NetCDF dimension size by hardcoded number `axorderT`: https://github.com/beatrixparis/connectivity-modeling-system/blob/fb491389261e895379f9f1bc943e46d66ab59684/cms-master/src/getphysicaldata.f90#L156-L158 Dimension orders are hardcoded here: https://github.com/beatrixparis/connectivity-modeling-system/blob/fb491389261e895379f9f1bc943e46d66ab59684/cms-master/src/getnestinfo.f90#L81-L86 and not updated anywhere past that place...