tracer
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beast-dev
Posterior summarisation in Bayesian phylogenetics
When a trace is flagged as constant, only the value should be shown on distribution plots (with an appropriate range for axis - i.e., +/-10% of value).
Hi! Maybe I badly misunderstand how Tracer should work, but it seems that many-to-many joint-marginal plot shows axis labels in incorrect, inverse order (or it transposes graphs, to the same...
Bumps [xstream](https://github.com/x-stream/xstream) from 1.4.8 to 1.4.19. Commits See full diff in compare view [](https://docs.github.com/en/github/managing-security-vulnerabilities/about-dependabot-security-updates#about-compatibility-scores) You can trigger a rebase of this PR by commenting `@dependabot rebase`. [//]: #...
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Bumps ant from 1.8.2 to 1.10.9. [](https://docs.github.com/en/github/managing-security-vulnerabilities/about-dependabot-security-updates#about-compatibility-scores) You can trigger a rebase of this PR by commenting `@dependabot rebase`. [//]: # (dependabot-automerge-start) [//]: # (dependabot-automerge-end) --- Dependabot commands...
Bumps commons-beanutils from 1.7.0 to 1.9.4. [](https://docs.github.com/en/github/managing-security-vulnerabilities/about-dependabot-security-updates#about-compatibility-scores) You can trigger a rebase of this PR by commenting `@dependabot rebase`. [//]: # (dependabot-automerge-start) [//]: # (dependabot-automerge-end) --- Dependabot commands...
Select multiple logs (having same parameters) and traces, go to the joint marginal panel. There are 2 * 3 traces selected. So the overlapping circles look like a bug. Also...
If I look at a variable with integer values between 0 and 1000, tracer will produce 1000 tick marks. The main problem is that the labels for the tick marks...
For example, only half of the posterior row is visible after reloading the trace file.
_From @msuchard on August 13, 2015 17:38_ Originally reported on Google Code with ID 167 ``` Would be nice to be able to output results of demographic analyses (e.g. skyline...
I.e., if the range is 25 - 100 then this range is only 25% smaller than 0 - 100 so we should include 0 on the axis. This should be...