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when i use diamond to align NR database with -f6, the second column is "BL_ORD_ID" instead of "accesion ID"?

Open work-liuyang opened this issue 1 year ago • 2 comments

ACLT-1_gene_41 BL_ORD_ID:468 36.9 111 67 2 43 150 332 442 1.03e-14 67.8 ACLT-1_gene_41 BL_ORD_ID:319 29.7 128 86 2 27 150 337 464 5.67e-13 62.8 ACLT-1_gene_41 BL_ORD_ID:931 32.0 103 66 2 31 130 336 437 7.71e-13 62.4 ACLT-1_gene_41 BL_ORD_ID:363 30.4 112 75 1 43 151 256 367 9.40e-13 62.0 ACLT-1_gene_41 BL_ORD_ID:904 32.7 113 72 2 41 150 245 356 1.49e-11 58.5 ACLT-1_gene_85 BL_ORD_ID:585 32.0 200 107 5 95 276 107 295 4.28e-19 83.2

so,what should I set the parameter? Thanks!

work-liuyang avatar Jul 10 '23 07:07 work-liuyang

The problem was resolved by run cmd 'makedb' again,but i also deal it by set the prameter 'sstitle',this is a strange bug.

work-liuyang avatar Jul 10 '23 08:07 work-liuyang

Are you using a BLAST database? If so, you need run run makeblastdb with the -parse_seqids option.

bbuchfink avatar Jul 12 '23 11:07 bbuchfink