diamond makedb with tmpdir gives error after version 2.1.0

[alexweisberg]

Hi,

When I run diamond makedb with the --tmpdir parameter, I get the following error:

diamond makedb --db test --in test.faa --tmpdir ./tmp

Error: Option is not permitted for this workflow: tmpdir

This parameter worked with makedb for all versions up to and including 2.0.15. Version 2.1.0 and after all give the above error message.

[bbuchfink]

Thanks, it will be fixed in the next release.

[alexweisberg]

Great! Thank you. On Apr 12, 2023 at 2:12 AM -0700, Benjamin Buchfink @.***>, wrote:

Thanks, it will be fixed in the next release. — Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you authored the thread.Message ID: @.***>

[lsamad]

how to solve this error( -bash: ./diamond: cannot execute binary file) when using mkdb?

[bbuchfink]

how to solve this error( -bash: ./diamond: cannot execute binary file) when using mkdb?

You are probably trying to run a binary incompatible with your system. Check that you have downloaded the correct one or try compiling from source.

[bbuchfink]

It should be fixed in the latest release.