AnchorWave

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proali Error:deNovoGenomeVariantCallingMultipleThreads.cpp:204

4

Error code: `Exited with exit code 134.` Error info : ``` anchorwave: /share/home/zhangsan/software/AnchorWave/AnchorWave/src/impl/deNovoGenomeVariantCallingMultipleThreads.cpp:204: void genomeAlignmentSingleThread(std::vector, bool, bool, std::ofstream&, std::ofstream&, std::__cxx11::string, std::__cxx11::string, std::__cxx11::string, std::__cxx11::string, int, std::__cxx11::string, std::__cxx11::string, int32_t, int32_t, int32_t, int32_t,...

chaimol

example data core dumped

1

Hi, Dr Song, Thanks for your wonderful tool. I meet an error when run the example(guideline zea & sorghum). wget ftp://ftp.ensemblgenomes.org/pub/plants/release-34/gff3/zea_mays/Zea_mays.AGPv4.34.gff3.gz gunzip Zea_mays.AGPv4.34.gff3.gz wget ftp://ftp.ensemblgenomes.org/pub/plants/release-34/fasta/zea_mays/dna/Zea_mays.AGPv4.dna.toplevel.fa.gz gunzip Zea_mays.AGPv4.dna.toplevel.fa.gz wget ftp://ftp.ensemblgenomes.org/pub/plants/release-49/fasta/sorghum_bicolor/dna/Sorghum_bicolor.Sorghum_bicolor_NCBIv3.dna.toplevel.fa.gz gunzip...

yuanw-18

fasta headers not read correctly by gff2seq

1

Some types of fasta headers are not being read correctly if they are using an identifier syntax. `>gi|1` is not read to match the gff file it runs correct when...

jessepoland

MAF FORMAT

1

Hi, Dr. Song I have an issue where I couldn't directly generate the VCF format using -IV. Therefore, I generated the data in MAF format. How can I extract inversion...

Zhaoqiyue5