ciatah
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Issue with computeMatchObjBtwnTrials
Hi Biafra,
After "modelVarsFromFiles", I'm trying to run computeMatchObjBtwnTrials, and get the following error:
I was successfully able to do this with the same data set just last week.. so I'm probably just making a stupid mistake. Any ideas what would cause this?
Omid
Sorry - Here's the full output
hey Omid, think I know what the issues are, I can push a quick patch to deal with this:
-
suptitle
error has to do with aBioinformatics
toolbox function I moved intociapkg
to prevent overloading Matlab functions, but it seems you don't have that toolbox installed, hence the first error. -
ciapkg.loadBatchFxns
error is likely because running macOS or Linux, I'll fix the folder separator call (currently\
vs.filesep
).
Couple quick questions:
- What's the output of
ciapkg.version
andciapkg.io.matlabToolboxCheck
? - Are you running this on macOS or Linux?
Thanks, Biafra.
ciapkg.version = 'v3.35.1'
ciapkg.io.matlabToolboxCheck reveals missing 2nd tier toolboxes (including bioinformatics), I will install.
Iām using macOS. Thanks again!
Omid
On Aug 24, 2021, at 13:56, Biafra Ahanonu @.@.>> wrote:
hey Omid, think I know what the issues are, I can push a quick patch to deal with this:
- suptitle error has to do with a Bioinformatics toolbox function I moved into ciapkg to prevent overloading Matlab functions, but it seems you don't have that toolbox installed, hence the first error.
- ciapkg.loadBatchFxns error is likely because running macOS or Linux, I'll fix the folder separator call (currently \ vs. filesep).
Couple quick questions:
- What's the output of ciapkg.version and ciapkg.io.matlabToolboxCheck?
- Are you running this on macOS or Linux?
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@omidm7 Great, thanks for the additional info. Pushed an update, can you try the current master branch and let me know if the issue still arises?
@bahanonu I just tried it on the current master branch and it works fine. Thanks! Omid
Great! š