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[bug] Singularity container link not reachable?

Open uloeber opened this issue 1 year ago • 3 comments

Description Unable to fetch singularity container

Steps to Reproduce Steps to reproduce the behavior:

singularity pull library://rpetit3/bactopia/bactopia
FATAL:   Unable to get library client configuration: remote has no library client

Expected Behavior Download singularity container

Execution Environment

Linux 3.10.0-1160.76.1.el7.x86_64 #1 SMP Wed Aug 10 16:21:17 UTC 2022 x86_64 GNU/Linux singularity --version apptainer version 1.1.5-2.el7 Additional Information Hi Robert, I try to run the pangenome workflow, however, something is going wrong setting up pirate and panroo at least. I installed bactopia via conda and after some days of trying to fix it, I decided to try using a singularity container. I get the error posted above. Is this a problem on our end or is the path the wrong one? Thanks in advance! Ulrike

uloeber avatar Feb 18 '23 22:02 uloeber