bactopia
[feature] Update docs with details of how bactopia handles long read only data
Related To
- [ ] Bactopia
Is this related to a problem?
It's not well documented how bactopia handles long read only data.
Is this something you would like to see added?
Yes please.
Describe the solution you'd like
Some information on how to run bactopia on long read only data and what bactopia does with the long read data.
Work in progress, but here are two starters
Process a single ONT sample - https://bactopia.github.io/usage-basic/#nanopore
Generate FOFN for ONT - https://bactopia.github.io/usage-basic/#nanopore_1
Hi @flashton2003
I'm cleaning up issues, the v3 documentation now handles this. So I'm going to go ahead and close this one!
Cheers, Robert
Thanks!
On Mon, Mar 25, 2024 at 9:58 PM Robert A. Petit III < @.***> wrote:
Hi @flashton2003 https://github.com/flashton2003
I'm cleaning up issues, the v3 documentation now handles this. So I'm going to go ahead and close this one!
Cheers, Robert
— Reply to this email directly, view it on GitHub https://github.com/bactopia/bactopia/issues/312#issuecomment-2018802494, or unsubscribe https://github.com/notifications/unsubscribe-auth/AAT6FER3VYSWOPBORPEDHK3Y2B6U7AVCNFSM5VO4B2PKU5DIOJSWCZC7NNSXTN2JONZXKZKDN5WW2ZLOOQ5TEMBRHA4DAMRUHE2A . You are receiving this because you were mentioned.Message ID: @.***>