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WIP: Expanded documentation (inc. @gteege's manual)
this PR substantially expands the Cogent documentation. the result is in two parts:
- An Introduction to Cogent, largely based on introductory text that already existed; and
- Cogent Reference Manual, largely based on @gteege's manual converted to reStructuredText.
rendered preview: https://cogent--334.org.readthedocs.build/en/334/
I've split this PR into two parts --- the majority of the commits (but not the majority of the changes) come from what is now #338; this PR notionally depends on changes introduced there.