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Published 20 hours ago • verified publisher icon atarashansky

How to process the raw h5ad?

Open jordan841220 opened this issue 10 months ago • 0 comments

I think the tutorial in Jupyter notebook is unclear that it took me a while to realize how to preprocess my raw .h5ad to a SAM object...And I actually found my answer in issue #66 .

It was clear that "When loading in raw data, SAMap will automatically process them with SAM and save the results to an *_pr.h5ad file." However, the information of how to "loading in raw data" is missing.

jordan841220 avatar Apr 19 '24 04:04 jordan841220