SVarp
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some questions about `svtigs`
Hi @asylvz , svtigs
is a cool representation, but I still have some questions about it:
how to get the breakpoints or call
variants? My process is aligning svtigs.fa
to ref.fa
, so that I could get the variants of ref
.
But how about the non-reference path? After got the variants of some_path
, how to augment the original graph by using this non-reference
variants ?
Sincerely Looking forward to your answer :D
Best regards, Wenjie