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some questions about `svtigs`

Open wjwei-handsome opened this issue 6 months ago • 4 comments

Hi @asylvz , svtigs is a cool representation, but I still have some questions about it:

how to get the breakpoints or call variants? My process is aligning svtigs.fa to ref.fa, so that I could get the variants of ref.

But how about the non-reference path? After got the variants of some_path, how to augment the original graph by using this non-reference variants ?

Sincerely Looking forward to your answer :D

Best regards, Wenjie

wjwei-handsome avatar Jul 30 '24 02:07 wjwei-handsome