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Open asoplata opened this issue 4 years ago • 23 comments

** http://www.opensciencechain.org ** Cyneuro ** V-neurostack ** Spikeinterface ** Chan zuck funding sci sw ** Czi eoss essential open source software ** Tutorial: Workflows for reproducible research in computational neuroscience https://rrcns.readthedocs.io/en/cns2012/ ** https://www.novelaneuro.com/

asoplata avatar Mar 12 '20 18:03 asoplata

https://www.mitpressjournals.org/doi/abs/10.1162/neco_a_01120

asoplata avatar Apr 23 '20 17:04 asoplata

arbor https://arbor.readthedocs.io/en/latest/

asoplata avatar May 06 '20 19:05 asoplata

https://github.com/SpikeInterface/spikeextractors

asoplata avatar Aug 15 '20 02:08 asoplata

https://github.com/chlubba/PyPNS

asoplata avatar Sep 11 '20 02:09 asoplata

add ebrains in general https://ebrains.eu/services/

asoplata avatar Sep 15 '21 22:09 asoplata

https://channelpedia.epfl.ch/

asoplata avatar Sep 16 '21 23:09 asoplata

https://github.com/emer/emergent

asoplata avatar Oct 12 '21 21:10 asoplata

https://github.com/benfulcher/hctsa https://bdtoolbox.org/ https://github.com/cengique/pandora-matlab

asoplata avatar Oct 12 '21 21:10 asoplata

https://gitlab.com/neurocomputing-lab/Inferior_OliveEMC/eden

asoplata avatar Oct 19 '21 19:10 asoplata

https://brainpy.readthedocs.io/en/latest/

asoplata avatar Jan 21 '22 16:01 asoplata

neuroscience gateway cloud

asoplata avatar Feb 01 '22 22:02 asoplata

https://docs.fedoraproject.org/en-US/neurofedora/compneuro-tools/

asoplata avatar Feb 02 '22 21:02 asoplata

Add contents from and link to

https://grey.colorado.edu/emergent/index.php/Comparison_of_Neural_Network_Simulators

asoplata avatar Feb 02 '22 21:02 asoplata

Ugh, apparently the website is offline now? Seems to have been updated regularly up until 2018 at least. Here's an archived snapshot of the site: https://web.archive.org/web/20190301105153/http://home.earthlink.net/~perlewitz/

asoplata avatar Feb 02 '22 21:02 asoplata

** add to z11 https://bbpteam.epfl.ch/nmc-portal/web/guest/welcome and https://observatory.brain-map.org/visualcoding/

asoplata avatar Feb 02 '22 21:02 asoplata

https://github.com/rougier/CNCC-2020

asoplata avatar Feb 11 '22 19:02 asoplata

https://bbp.epfl.ch/nmc-portal/welcome.html

asoplata avatar Mar 01 '22 15:03 asoplata

https://github.com/norse/norse list of similar software

asoplata avatar Mar 01 '22 15:03 asoplata

https://github.com/LFPy/LFPykit

asoplata avatar Mar 01 '22 16:03 asoplata

https://open-neuroscience.com/

asoplata avatar Mar 09 '22 15:03 asoplata

https://ebrains.eu/

asoplata avatar Mar 18 '22 13:03 asoplata

https://github.com/AllenInstitute/biophys_optimize

asoplata avatar Mar 21 '22 14:03 asoplata

https://github.com/PTDZ/SORTED

asoplata avatar Aug 12 '22 16:08 asoplata