intervene intervene venn doesn't work with "--bedtools-option s=True"

intervene venn doesn't work with "--bedtools-option s=True"

Open kerenzhou062 opened this issue 5 years ago • 2 comments

Can intervene be complemented with "bedtools intersect -s "? (that is intersecting peaks by strand)

Dec 02 '19 18:12 kerenzhou062

You should use like this: intervene venn -i *.bed --bedtools-option s instead of s=True or -s

Dec 02 '19 19:12 asntech

I tried run intervene venn --bedtools-options s, but it returned the same result with that without --bedtools-options s.

Dec 02 '19 20:12 kerenzhou062