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Medical Image Segmentation using Squeeze-and-Expansion Transformers

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Hi~please help me figure out some questions. 1. i found that " python3 train2d.py --task refuge --ds train,valid,test --split all --maxiter 10000 --net unet-scratch " should be " --task fundus",...

![Screenshot 2022-05-09 174149](https://user-images.githubusercontent.com/62042231/167394282-160b77c5-b160-4947-a114-d9e33480a852.jpg) I got the error AttributeError: 'EasyDict' object has no attribute 'use_mince_transformer' as shown. I tried to fix it but it didn't work. Please tell me how to...

thanks for sharing this great project , and i met some problems when use it for LUNA16 dataset segmentation .the training loss is low ,but the test reaults are :dice:...

Thanks for your great project! I downloaded REFUGE dataset but the name and number of image files are different from names in this repo! For example, training part has 360...

Thanks for your great project! Sir,I want to train new 2D data with pretrained model,how could I do that?

When I train polyp datasets, the error occured, logs as before: ``` 10 epochs, 1002 itertations each. 0%| | 0/10 [00:00

![image](https://github.com/askerlee/segtran/assets/109911339/1dcd272a-a1b5-432d-8ec5-e66e771fc3e1) I am trying to use the transunet for as the --net argument. However it throws an error as depited in the image.The error reads as :"Traceback (most recent call...

How can I train with my own dataset? I have prepared the masks and images folder (2d segmentation) as similar to fundus but I am not sure on how to...

Dear author: REFUGE20的checkpoint使用的是什么预训练的CNN backbone呢?