asalt

Results 5 comments of asalt

Update percolator to pepxml rewriting

I recently got an error that seems related to this: Cannot find output_report_topN parameter from .... pepXML Process 'Percolator: Convert to pepxml' finished, exit code: 1 Process returned non-zero exit...

MS Fragger stops during combination of results from slices

@DirkBenndorf did you ever find a solution? I am having the same error when splitting database: ```Traceback (most recent call last): File "/home/amms06/tools/FragPipe-22.0/fragpipe/tools/msfragger_pep_split.py", line 631, in main() File "/home/amms06/tools/FragPipe-22.0/fragpipe/tools/msfragger_pep_split.py", line...

MS Fragger stops during combination of results from slices

Full log is attached, though I've found the problem. My computer was running out of memory putting together all the pin files. There are 25 pepXML and pin files to...

MS Fragger stops during combination of results from slices

( I have a fork here, untested as of now, though there may be a better solution. If https://github.com/asalt/FragPipe/blob/msfragger-pep-split-fix/MSFragger-GUI/tools/msfragger_pep_split.py )

Multiple Annotations With Same Colour Scale Cause Many Legends

A possible solution is you could define multiple HeatmapAnnotations and stack them on top of each other (or next to each other if rowAnnotation), and set `show_legend = FALSE` for...