Hi, i am trying to run rgi heatmap and it gives following error.
rgi heatmap --input /home/bvs/Neelam/rgi/res_test --output out
Traceback (most recent call last):
File "/home/bvs/.local/bin/rgi", line 4, in
MainBase()
File "/home/bvs/.local/lib/python3.8/site-packages/app/MainBase.py", line 82, in init
getattr(self, args.command)()
File "/home/bvs/.local/lib/python3.8/site-packages/app/MainBase.py", line 336, in heatmap
self.heatmap_run(args)
File "/home/bvs/.local/lib/python3.8/site-packages/app/MainBase.py", line 357, in heatmap_run
obj.run()
File "/home/bvs/.local/lib/python3.8/site-packages/app/Heatmap.py", line 836, in run
g = sns.heatmap(df, cmap=custom_cmap, cbar=False, norm=norm) #linewidth=0.5
File "/home/bvs/.local/lib/python3.8/site-packages/seaborn/_decorators.py", line 46, in inner_f
return f(**kwargs)
File "/home/bvs/.local/lib/python3.8/site-packages/seaborn/matrix.py", line 540, in heatmap
plotter = _HeatMapper(data, vmin, vmax, cmap, center, robust, annot, fmt,
File "/home/bvs/.local/lib/python3.8/site-packages/seaborn/matrix.py", line 159, in init
self._determine_cmap_params(plot_data, vmin, vmax,
File "/home/bvs/.local/lib/python3.8/site-packages/seaborn/matrix.py", line 198, in _determine_cmap_params
vmin = np.nanmin(calc_data)
File "<array_function internals>", line 180, in nanmin
File "/home/bvs/.local/lib/python3.8/site-packages/numpy/lib/nanfunctions.py", line 344, in nanmin
res = np.fmin.reduce(a, axis=axis, out=out, **kwargs)
ValueError: zero-size array to reduction operation fmin which has no identity
Thank you!