Issue of import dynamo

[wulc21]

Hi dear professor, After finishing install of dynamo on my MAC book, I failed to import dynamo at the first step, could you help me solve the problem, thank you very much.

Python 3.8.5 (default, Sep 4 2020, 02:22:02) [Clang 10.0.0 ] :: Anaconda, Inc. on darwin Type "help", "copyright", "credits" or "license" for more information. >>> import dynamo as dyn |-----> setting visualization default mode in dynamo. Your customized matplotlib settings might be overritten. /Users/zhuiyue718/opt/anaconda3/lib/python3.8/site-packages/nxviz/init.py:18: UserWarning: nxviz has a new API! Version 0.7.3 onwards, the old class-based API is being deprecated in favour of a new API focused on advancing a grammar of network graphics. If your plotting code depends on the old API, please consider pinning nxviz at version 0.7.3, as the new API will break your old code.

To check out the new API, please head over to the docs at https://ericmjl.github.io/nxviz/ to learn more. We hope you enjoy using it!

(This deprecation message will go away in version 1.0.)

warnings.warn( In :

[Xiaojieqiu]

did you import dynamo successfully? your warning information posted comes from nxviz and should not affect the importing

[wulc21]

Thanks for your kind reply.

I tried several times, but I still failed to import dynamo.

I also tried to import nxviz before import dynamo, the process stoped at "In:"

######## Python 3.8.5 (default, Sep 4 2020, 02:22:02) [Clang 10.0.0 ] :: Anaconda, Inc. on darwin Type "help", "copyright", "credits" or "license" for more information.

import nxviz /Users/zhuiyue718/opt/anaconda3/lib/python3.8/site-packages/nxviz/init.py:18: UserWarning: nxviz has a new API! Version 0.7.3 onwards, the old class-based API is being deprecated in favour of a new API focused on advancing a grammar of network graphics. If your plotting code depends on the old API, please consider pinning nxviz at version 0.7.3, as the new API will break your old code.

To check out the new API, please head over to the docs at https://ericmjl.github.io/nxviz/ to learn more. We hope you enjoy using it!

(This deprecation message will go away in version 1.0.)

warnings.warn(

import dynamo as dys |-----> setting visualization default mode in dynamo. Your customized matplotlib settings might be overritten. In : In : In :

[Xiaojieqiu]

it looks to me you imported it successfully already. what do you mean by stopped at ln? can you run something like adata = dyn.sample_data.pancreatic_endocrinogenesis() when you are at that state?

[wulc21]

Thank you very much. I mean the command line stop at " In:" , I could not start run the new command line without ">>> "

############# Python 3.8.5 (default, Sep 4 2020, 02:22:02) [Clang 10.0.0 ] :: Anaconda, Inc. on darwin Type "help", "copyright", "credits" or "license" for more information. >>> import nxviz /Users/zhuiyue718/opt/anaconda3/lib/python3.8/site-packages/nxviz/init.py:18: UserWarning: nxviz has a new API! Version 0.7.3 onwards, the old class-based API is being deprecated in favour of a new API focused on advancing a grammar of network graphics. If your plotting code depends on the old API, please consider pinning nxviz at version 0.7.3, as the new API will break your old code.

To check out the new API, please head over to the docs at https://ericmjl.github.io/nxviz/ to learn more. We hope you enjoy using it!

(This deprecation message will go away in version 1.0.)

warnings.warn(

import dynamo as dys |-----> setting visualization default mode in dynamo. Your customized matplotlib settings might be overritten. In : In : In : adata = dys.sample_data.pancreatic_endocrinogenesis() Traceback (most recent call last): File "", line 1, in NameError: name 'dys' is not defined In : In : In :

[Xiaojieqiu]

this doesn't make any sense.This is the screenshot on my end when I use python 3.7:

Also, please consider discussing with anyone in your lab who has better knowledge in python.

[Xiaojieqiu]

please also consider install via github, see:

See our installation instruction here: https://dynamo-release.readthedocs.io/en/latest/ten_minutes_to_dynamo.html#how-to-install

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