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Export markdown notes doesn't work with zotero-shortdoi plugin active

Open danieltomasz opened this issue 5 years ago • 14 comments

Describe the bug A clear and concise description of what the bug is.

To Reproduce

Right click on pdf and choose extract annotations Right click on extracted annotations and click on Export to markdown Choose the folder Nothing appears in the folder

A clear and concise description of what you expected to happen.

  • A extracted md file will appear.

Screenshots If applicable, add screenshots to help explain your problem.

My settings image image

Desktop (please complete the following information):

  • OS: [MacOS Big Sur]
  • Zotero version: [v5.0.93]
  • Mdnotes version: [ v0.1.2]
  • Zotfile version: [v5.0.16]
  • BetterBibtex version: [v5.2.89]

Additional context Add any other context about the problem here. The md file is saved as undefinedthe-involvement-of-endogenous-neural-oscillations-in-the-processing-of-rhythmic-input-more-than-a-regular-repetition-of-evoked-neural-responsesundefined.md the name of the pdf is Zoefel et al. - 2018 - The Involvement of Endogenous Neural Oscillations in the Processing of Rhythmic Input More Than a R.pdf The author and citation of the item are defined in the Zotero.

danieltomasz avatar Nov 30 '20 13:11 danieltomasz

From your markdown file, the undefined hints that there is some problem with the citekey or BetterBibtex, could you show me what citekey does your item have?

argenos avatar Dec 01 '20 11:12 argenos

I wrote that file is saved with "undefinedname...", actually only window to save appears and no file after that My Zotero item: image

BetterBibtex debugging report

Application: Zotero 5.0.93 en-GB
Platform: MacIntel Intel Mac OS X 10.16
Addons:
  ZotFile (5.0.16, extension)
  Zotero OCR (0.3.0, extension)
  Zotero Storage Scanner (5.0.8, extension)
  ZoteroQuickLook (1.4.2, extension)
  Zutilo Utility for Zotero (3.5.0, extension)
  Mdnotes for Zotero (0.1.2, extension)
  scite Plugin for Zotero (1.0.5, extension)
  Zotero DOI Manager (1.3.9, extension)
  Zotero Memento (1.0.0, extension)
  Better BibTex for Zotero (5.2.89, extension)
  Zotero LibreOffice Integration (5.0.25.SA.5.0.93, extension)
  Zotero Word for Mac Integration (5.0.29.SA.5.0.93, extension)
  Zotero Roam Export (1.2, extension, disabled)
Settings:
  DOIandURL = "both"
  ascii = ""
  asciiBibLaTeX = true
  asciiBibTeX = true
  autoAbbrev = false
  autoAbbrevStyle = ""
  autoExport = "immediate"
  autoExportDelay = 1
  autoExportIdleWait = 10
  autoExportPathReplaceDiacritics = false
  autoExportPathReplaceDirSep = "-"
  autoExportPathReplaceSpace = " "
  autoPinDelay = 2
  automaticTags = true
  auxImport = false
  biblatexExtendedDateFormat = true
  biblatexExtendedNameFormat = true
  biblatexExtractEprint = true
  bibtexParticleNoOp = false
  bibtexURL = "off"
  cacheFlushInterval = 5
  citeCommand = "cite"
  citekeyFold = true
  citekeyFormat = "[auth:lower][year]"
  citeprocNoteCitekey = false
  csquotes = ""
  debugLogDir = ""
  exportBibTeXStrings = "off"
  exportBraceProtection = true
  exportTitleCase = true
  extraMergeCSL = true
  extraMergeCitekeys = true
  extraMergeTeX = true
  git = "config"
  ignorePostscriptErrors = true
  import = true
  importBibTeXStrings = true
  importCaseProtection = "as-needed"
  importCitationKey = true
  importExtra = true
  importJabRefAbbreviations = true
  importJabRefStrings = true
  importSentenceCase = "on+guess"
  itemObserverDelay = 5
  jabrefFormat = 0
  keyConflictPolicy = "keep"
  keyScope = "library"
  kuroshiro = false
  mapMath = ""
  mapText = ""
  mapUnicode = "conservative"
  newTranslatorsAskRestart = false
  parseParticles = true
  platform = "mac"
  postscript = ""
  postscriptOverride = ""
  qualityReport = false
  quickCopyMode = "latex"
  quickCopyPandocBrackets = false
  rawImports = false
  rawLaTag = "#LaTeX"
  relativeFilePaths = false
  retainCache = false
  scrubDatabase = false
  skipFields = ""
  skipWords = "a,ab,aboard,about,above,across,after,against,al,along,amid,among,an,and,anti,around,as,at,before,behind,below,beneath,beside,besides,between,beyond,but,by,d,da,das,de,del,dell,dello,dei,degli,della,dell,delle,dem,den,der,des,despite,die,do,down,du,during,ein,eine,einem,einen,einer,eines,el,en,et,except,for,from,gli,i,il,in,inside,into,is,l,la,las,le,les,like,lo,los,near,nor,of,off,on,onto,or,over,past,per,plus,round,save,since,so,some,sur,than,the,through,to,toward,towards,un,una,unas,under,underneath,une,unlike,uno,unos,until,up,upon,versus,via,von,while,with,within,without,yet,zu,zum"
  strings = ""
  testing = false
  verbatimFields = "url,doi,file,eprint,verba,verbb,verbc"
  warnBulkModify = 10
  warnTitleCased = false
  workers = 0
  Zotero: export.quickCopy.setting = "export=8dbf9b92-f796-4153-8f2e-ac6c157500dc"
LocaleDateOrder: dmy
Total export workers started: 0, currently running: 0

danieltomasz avatar Dec 01 '20 11:12 danieltomasz

Thanks for the extra input! To clarify, the fact that your file name contains undefined twice means that somewhere in the process of exporting, mdnotes was not able to access the required field (e.g. the citekey or something else). I wasn't able to reproduce this, but I added a few debug messages to this build: mdnotes-0.1.2-fx.zip. To install it you need to change the extension from zip to xpi.

After installing this version, could you go to Help > Debug output logging > Enable. Try exporting to markdown once again. After that, Help > Debug output logging > View output > File > Save. It should generate an HTML file that you can upload it to this issue by dragging and dropping it here.

argenos avatar Dec 01 '20 14:12 argenos

I have problem with generating html but I have output


[JavaScript Error: "TypeError: dois[0] is undefined" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellText@chrome://zotero-scite/content/Scite.js:161:12


[JavaScript Error: "TypeError: dois[0] is undefined" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellProperties@chrome://zotero-scite/content/Scite.js:156:47


[JavaScript Error: "TypeError: dois[0] is undefined" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellText@chrome://zotero-scite/content/Scite.js:161:12


[JavaScript Error: "TypeError: dois[0] is undefined" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellProperties@chrome://zotero-scite/content/Scite.js:156:47


[JavaScript Error: "TypeError: dois[0] is undefined" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellText@chrome://zotero-scite/content/Scite.js:161:12


[JavaScript Error: "TypeError: dois[0] is undefined" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellProperties@chrome://zotero-scite/content/Scite.js:156:47


[JavaScript Error: "TypeError: dois[0] is undefined" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellText@chrome://zotero-scite/content/Scite.js:161:12


[JavaScript Error: "TypeError: undefined has no properties" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellProperties@chrome://zotero-scite/content/Scite.js:156:47


[JavaScript Error: "TypeError: undefined has no properties" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellText@chrome://zotero-scite/content/Scite.js:161:12


[JavaScript Error: "TypeError: undefined has no properties" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellProperties@chrome://zotero-scite/content/Scite.js:156:47


[JavaScript Error: "TypeError: undefined has no properties" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellText@chrome://zotero-scite/content/Scite.js:161:12


[JavaScript Error: "TypeError: undefined has no properties" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellProperties@chrome://zotero-scite/content/Scite.js:156:47


[JavaScript Error: "TypeError: undefined has no properties" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellText@chrome://zotero-scite/content/Scite.js:161:12


[JavaScript Error: "TypeError: undefined has no properties" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellProperties@chrome://zotero-scite/content/Scite.js:156:47


[JavaScript Error: "TypeError: undefined has no properties" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellText@chrome://zotero-scite/content/Scite.js:161:12


[JavaScript Error: "TypeError: undefined has no properties" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellProperties@chrome://zotero-scite/content/Scite.js:156:47


[JavaScript Error: "TypeError: undefined has no properties" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellText@chrome://zotero-scite/content/Scite.js:161:12


[JavaScript Error: "TypeError: undefined has no properties" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellProperties@chrome://zotero-scite/content/Scite.js:156:47


[JavaScript Error: "TypeError: undefined has no properties" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellText@chrome://zotero-scite/content/Scite.js:161:12


[JavaScript Error: "TypeError: undefined has no properties" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellProperties@chrome://zotero-scite/content/Scite.js:156:47


[JavaScript Error: "TypeError: undefined has no properties" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellText@chrome://zotero-scite/content/Scite.js:161:12


[JavaScript Error: "TypeError: undefined has no properties" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellProperties@chrome://zotero-scite/content/Scite.js:156:47


[JavaScript Error: "TypeError: undefined has no properties" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellText@chrome://zotero-scite/content/Scite.js:161:12


[JavaScript Error: "TypeError: undefined has no properties" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellProperties@chrome://zotero-scite/content/Scite.js:156:47


[JavaScript Error: "TypeError: undefined has no properties" {file: "chrome://zotero-scite/content/Scite.js" line: 74}]
getDOI@chrome://zotero-scite/content/Scite.js:74:5
getCellX@chrome://zotero-scite/content/Scite.js:140:17
Zotero_ItemTreeView_prototype_getCellText@chrome://zotero-scite/content/Scite.js:161:12


version => 5.0.93, platform => MacIntel, oscpu => Intel Mac OS X 10.16, locale => en-GB, appName => Zotero, appVersion => 5.0.93, extensions => ZotFile (5.0.16, extension), Zotero OCR (0.3.0, extension), Zotero Storage Scanner (5.0.8, extension), ZoteroQuickLook (1.4.2, extension), Zutilo Utility for Zotero (3.5.0, extension), scite Plugin for Zotero (1.0.5, extension), Zotero DOI Manager (1.3.9, extension), Zotero Memento (1.0.0, extension), Better BibTex for Zotero (5.2.89, extension), Mdnotes for Zotero (0.1.2, extension), Zotero LibreOffice Integration (5.0.25.SA.5.0.93, extension), Zotero Word for Mac Integration (5.0.29.SA.5.0.93, extension), Zotero Roam Export (1.2, extension, disabled)

(4)(+0077488): SELECT IA.itemID FROM itemAttachments IA NATURAL JOIN items I LEFT JOIN itemData ID ON (IA.itemID=ID.itemID AND fieldID=13) LEFT JOIN itemDataValues IDV ON (ID.valueID=IDV.valueID) WHERE parentItemID=? AND linkMode NOT IN (3) AND IA.itemID NOT IN (SELECT itemID FROM deletedItems) ORDER BY contentType='application/pdf' DESC, value=? DESC, dateAdded ASC [6095, 'http://journal.frontiersin.org/article/10.3389/fnins.2018.00095/full']

(4)(+0000005): SELECT IA.itemID FROM itemAttachments IA NATURAL JOIN items I LEFT JOIN itemData ID ON (IA.itemID=ID.itemID AND fieldID=13) LEFT JOIN itemDataValues IDV ON (ID.valueID=IDV.valueID) WHERE parentItemID=? AND linkMode NOT IN (3) AND IA.itemID NOT IN (SELECT itemID FROM deletedItems) ORDER BY contentType='application/pdf' DESC, value=? DESC, dateAdded ASC [6095, 'http://journal.frontiersin.org/article/10.3389/fnins.2018.00095/full']

(4)(+0000002): SELECT IA.itemID FROM itemAttachments IA NATURAL JOIN items I LEFT JOIN itemData ID ON (IA.itemID=ID.itemID AND fieldID=13) LEFT JOIN itemDataValues IDV ON (ID.valueID=IDV.valueID) WHERE parentItemID=? AND linkMode NOT IN (3) AND IA.itemID NOT IN (SELECT itemID FROM deletedItems) ORDER BY contentType='application/pdf' DESC, value=? DESC, dateAdded ASC [6095, 'http://journal.frontiersin.org/article/10.3389/fnins.2018.00095/full']

(4)(+0000003): SELECT IA.itemID FROM itemAttachments IA NATURAL JOIN items I LEFT JOIN itemData ID ON (IA.itemID=ID.itemID AND fieldID=13) LEFT JOIN itemDataValues IDV ON (ID.valueID=IDV.valueID) WHERE parentItemID=? AND linkMode NOT IN (3) AND IA.itemID NOT IN (SELECT itemID FROM deletedItems) ORDER BY contentType='application/pdf' DESC, value=? DESC, dateAdded ASC [6095, 'http://journal.frontiersin.org/article/10.3389/fnins.2018.00095/full']

(3)(+0000003): MIME type application/pdf cannot be handled internally

(4)(+0000001): SELECT IA.itemID FROM itemAttachments IA NATURAL JOIN items I LEFT JOIN itemData ID ON (IA.itemID=ID.itemID AND fieldID=13) LEFT JOIN itemDataValues IDV ON (ID.valueID=IDV.valueID) WHERE parentItemID=? AND linkMode NOT IN (3) AND IA.itemID NOT IN (SELECT itemID FROM deletedItems) ORDER BY contentType='application/pdf' DESC, value=? DESC, dateAdded ASC [6095, 'http://journal.frontiersin.org/article/10.3389/fnins.2018.00095/full']

(3)(+0000004): {Zutilo} Tue Dec 01 2020 19:08:57 GMT+0100 (CET): targetItems: 1

(3)(+0000000): {Zutilo} Tue Dec 01 2020 19:08:57 GMT+0100 (CET): clipboard: D1604585370

(3)(+0000000): {Zutilo} Tue Dec 01 2020 19:08:57 GMT+0100 (CET): targetItems: 1

(3)(+0000000): {Zutilo} Tue Dec 01 2020 19:08:57 GMT+0100 (CET): clipboard: D1604585370

(3)(+0000000): {Zutilo} Tue Dec 01 2020 19:08:57 GMT+0100 (CET): targetItems: 1

(3)(+0000000): {Zutilo} Tue Dec 01 2020 19:08:57 GMT+0100 (CET): clipboard: D1604585370

(4)(+0000356): SELECT IA.itemID FROM itemAttachments IA NATURAL JOIN items I LEFT JOIN itemData ID ON (IA.itemID=ID.itemID AND fieldID=13) LEFT JOIN itemDataValues IDV ON (ID.valueID=IDV.valueID) WHERE parentItemID=? AND linkMode NOT IN (3) AND IA.itemID NOT IN (SELECT itemID FROM deletedItems) ORDER BY contentType='application/pdf' DESC, value=? DESC, dateAdded ASC [6095, 'http://journal.frontiersin.org/article/10.3389/fnins.2018.00095/full']

(3)(+0005110): Exporting a regular Zotero item

(3)(+0000003): File name: undefinedthe-involvement-of-endogenous-neural-oscillations-in-the-processing-of-rhythmic-input-more-than-a-regular-repetition-of-evoked-neural-responses - Extracted Annotations (30112020, 145131)undefined

(3)(+0000000): File name: undefinedthe-involvement-of-endogenous-neural-oscillations-in-the-processing-of-rhythmic-input-more-than-a-regular-repetition-of-evoked-neural-responsesundefined

(3)(+0000000): File name: undefinedthe-involvement-of-endogenous-neural-oscillations-in-the-processing-of-rhythmic-input-more-than-a-regular-repetition-of-evoked-neural-responsesundefined

(3)(+0000000): Available metadata:

(3)(+0000001): { "author": [ "0": "Benedikt Zoefel" "1": "Sanne ten Oever" "2": "Alexander T. Sack" ] "contributor": [] "editor": [] "reviewedAuthor": [] "translator": [] "title": "The Involvement of Endogenous Neural Oscillations in the Processing of Rhythmic Input: More Than a Regular Repetition of Evoked Neural Responses" "abstractNote": "It is undisputed that presenting a rhythmic stimulus leads to a measurable brain response that follows the rhythmic structure of this stimulus. What is still debated, however, is the question whether this brain response exclusively reflects a regular repetition of evoked responses, or whether it also includes entrained oscillatory activity. Here we systematically present evidence in favor of an involvement of entrained neural oscillations in the processing of rhythmic input while critically pointing out which questions still need to be addressed before this evidence could be considered conclusive. In this context, we also explicitly discuss the potential functional role of such entrained oscillations, suggesting that these stimulus-aligned oscillations reflect, and serve as, predictive processes, an idea often only implicitly assumed in the literature." "publicationTitle": "Frontiers in Neuroscience" "volume": "12" "issue": "" "pages": "95" "date": "2018-3-7" "series": "" "seriesTitle": "" "seriesText": "" "journalAbbreviation": "Front. Neurosci." "language": "en" "DOI": "[10.3389/fnins.2018.00095](https://doi.org/10.3389/fnins.2018.00095)" "ISSN": "1662-453X" "shortTitle": "The Involvement of Endogenous Neural Oscillations in the Processing of Rhythmic Input" "url": "[http://journal.frontiersin.org/article/10.3389/fnins.2018.00095/full](http://journal.frontiersin.org/article/10.3389/fnins.2018.00095/full)" "accessDate": "2020-11-15 16:10:21" "archive": "" "archiveLocation": "" "libraryCatalog": "DOI.org (Crossref)" "callNumber": "" "rights": "" "extra": "Citation Key: zoefel2018" "itemType": "Article" "citekey": "zoefel2018" "collections": [ "0": "From Daniele" ] "related": [] "tags": [] "pdfAttachments": [ "0": "[Zoefel et al. - 2018 - The Involvement of Endogenous Neural Oscillations in the Processing of Rhythmic Input More Than a R.pdf](file:///Users/daniel/Dropbox/Zotero/Zoefel%20et%20al.%20-%202018%20-%20The%20Involvement%20of%20Endogenous%20Neural%20Oscillations%20in%20the%20Processing%20of%20Rhythmic%20Input%20More%20Than%20a%20R.pdf)" ] "localLibrary": "[Local library](zotero://select/items/1_F9NKPI2N)" "cloudLibrary": "[Cloud library](http://zotero.org/users/2475454/items/F9NKPI2N)" "dateAdded": "2020-10-15" "notes": [ "0": "undefinedthe-involvement-of-endogenous-neural-oscillations-in-the-processing-of-rhythmic-input-more-than-a-regular-repetition-of-evoked-neural-responses - Extracted Annotations (30112020, 145131)undefined" ] "mdnotesFileName": "undefinedthe-involvement-of-endogenous-neural-oscillations-in-the-processing-of-rhythmic-input-more-than-a-regular-repetition-of-evoked-neural-responsesundefined" "metadataFileName": "undefinedthe-involvement-of-endogenous-neural-oscillations-in-the-processing-of-rhythmic-input-more-than-a-regular-repetition-of-evoked-neural-responsesundefined" }

(3)(+0000014): Error:

danieltomasz avatar Dec 01 '20 18:12 danieltomasz

And another try with turned off scite

Debug Output.html.zip

danieltomasz avatar Dec 01 '20 18:12 danieltomasz

Thanks! I have some suspicions of where the problem can be. Could you downgrade to v0.1.1 and let me know if that works?

argenos avatar Dec 04 '20 17:12 argenos

I downgraded but I still cannot export markdown or do anything else :(

danieltomasz avatar Dec 05 '20 11:12 danieltomasz

Huh, that was unexpected. Does the name of the file follow the same rules as before? From the logs you sent me it seemed everything was correctly extracted (including the citekey), but for some reason you have an undefined before and one after and the citekey is not in your file name. Was this working before (do you remember the version?) or is this a new install (you've never used mdnotes before?).

I'll try to set up another fix with more debug info to try to narrow down the problem.

argenos avatar Dec 05 '20 13:12 argenos

This was the first try;

Edit: I created new empty profile and installed v0.1.1 and it works!

I did notice one thing - I didn't use default BBT citekey format "goffmanForms1981" instead I changed it to authorYear goffman1981 in setting later

Now i will try 0.1.2!

danieltomasz avatar Dec 05 '20 13:12 danieltomasz

I think that shouldn't cause any issues. Could you show me your settings for Edit > Preferences > Advanced > Config Editor and filter for mdnotes.files? I suspect there is a problem with the suffix/prefix of the mdnotes file

argenos avatar Dec 05 '20 13:12 argenos

@argenos I found the cause - I cannot export when I have active this addon https://github.com/bwiernik/zotero-shortdoi I turned off the plugin and I could use Zotero without it.

sorry I didn't check this earlier - maybe you could update bug template issue asking people if your plugin will work with a new profile, so it could save time you and people claiming bugs when there is interference from other plugins

danieltomasz avatar Dec 05 '20 14:12 danieltomasz

Thanks! I will add this to the template for sure and add some instructions for debugging (including the new profile).

As for the second note link, sometimes the Zotero notes don't correctly split the first line. Once you've opened that note, it should be fixed and you can try re-exporting.

argenos avatar Dec 05 '20 15:12 argenos

I removed my question about notes from this topic and created new issue where I explained it more clearly

danieltomasz avatar Dec 05 '20 15:12 danieltomasz

I can confirm that this is indeed the issue: turning off the zotero-shortdoi plugin fixed the output for me as well.

jellehuisman avatar Feb 24 '21 12:02 jellehuisman