Arun Ahuja
Arun Ahuja
From @rleonid's work, a lot of tools custom installation can be replaced by a opam or conda invocation. One tool, for example, is STAR. `conda install star`. I'd like to...
Current variant calling/Mutect parallelization only uses major contigs right now. But, with B38, this would drop ALT contigs Not dropping them makes sense, but in general variant calling likely needs...
Cycledash requires the normal/tumor BAMs exist at a location on HDFS The current `post_vcf` function provides local paths to BAMs which Cycledash won't be able to access. Also, it requires...
Looks like the BeautifulSoup dependency does not work on py3. Is there a reason for this specific BS version as opposed to bs4? ``` pip install fauxtograph Collecting fauxtograph Downloading...