openfold.utils.kernel.csrc' as an importable package[^1], when pip install 'openfold @ git+https://github.com/aqlaboratory/openfold.git@4b41059694619831a7db195b7e0988fc4ff3a307'

[Alain-chavanieu]

Hello

I try to install diffdock on a linux station(redhat 7.3) (from https://github.com/gcorso/DiffDock) When i did the last step : pip install 'openfold @ git+https://github.com/aqlaboratory/openfold.git@4b41059694619831a7db195b7e0988fc4ff3a307'

I had a fatal error (1 openfold package missing)

Can you help me ?

Thank you

alain

ps : on another machine in redhat 8.4 all was fine

/mnt/DATA2TO/home/PROG/anaconda3/envs/diffdock/lib/python3.8/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'openfold.utils.kernel.csrc' is absent from the packages configuration. !!

          ********************************************************************************
          ############################
          # Package would be ignored #
          ############################
          Python recognizes 'openfold.utils.kernel.csrc' as an importable package[^1],
          but it is absent from setuptools' `packages` configuration.
  
          This leads to an ambiguous overall configuration. If you want to distribute this
          package, please make sure that 'openfold.utils.kernel.csrc' is explicitly added
          to the `packages` configuration field.
  
          Alternatively, you can also rely on setuptools' discovery methods
          (for example by using `find_namespace_packages(...)`/`find_namespace:`
          instead of `find_packages(...)`/`find:`).

============ On my machine i have as pytorch in this env : pytorch 1.13.1 py3.8_cuda11.7_cudnn8.5.0_0 pytorch pytorch-cluster 1.6.1 py38_torch_1.13.0_cu117 pyg pytorch-cuda 11.7 h778d358_5 pytorch pytorch-lightning 2.0.3 pypi_0 pypi pytorch-mutex 1.0 cuda pytorch pytorch-scatter 2.1.1 py38_torch_1.13.0_cu117 pyg pytorch-sparse 0.6.17 py38_torch_1.13.0_cu117 pyg pytorch-spline-conv 1.2.2 py38_torch_1.13.0_cu117 pyg

[dhanfort]

I have the same issue in this step of running the OpenFold installation for the DiffDock. I ran both installations in new environments in Windows and Ubuntu and both gave the same error. If anyone can help fix this, that would be greatly appreciated. Thank you!

[evancollins1]

Was this resolved? I am getting the same error. Thanks