Asher Preska Steinberg

Hi Andre, I've gone through the tutorial which was super helpful! I do have a few follow-up questions though as I move onto applying this to my own data: 1....

Hi Andre, Thank you so much for this very thoughtful response. The background really helps me wrap my head around this. I started to explore the distributions of NDRs for...

Hi Andre, Thank you again, this is really helpful. For 1, this makes sense thanks for explaining. For 2, got i, thanks for explaining this point as well. This makes...

Hi Andre, Re: the low NDR. That's great, and thanks for explaining this really helps. Re: increasing sensitivity. Okay sounds good -- I will give the latter, safer option a...

Hi Andre, Sorry for all the questions here, but upon examining these data more, I'm realizing that when I look at the readCount column for the merged summarized experiment object...

Hi Andre, Great, I'm glad. :) Re: minimum read counts. Okay sounds good, thanks for looking into this! Re: interpretation of readCounts. Got it, okay thanks for explaining this, it...

Hi Andre, No worries at all, thank you again for your help. I just took a look at my code, and I am very embarrassed to report that I think...

Hi Andre, Yes! It appears that this was indeed the issue, thank you again. :) Re: sample names. Got it, I was referring to the grangesList -- but regardless it...

Were you able to resolve this in the end? I am getting a similar error.

Hi @asan-emirsaleh, Got it, thanks this is all useful to know! Best, Asher