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HBASE-26827 RegionServer JVM crash when compact mob table

Open mymeiyi opened this issue 2 years ago • 10 comments

mymeiyi avatar Mar 11 '22 08:03 mymeiyi

Great! LGTM.

GeorryHuang avatar Mar 11 '22 09:03 GeorryHuang

:confetti_ball: +1 overall

Vote Subsystem Runtime Comment
+0 :ok: reexec 6m 29s Docker mode activated.
_ Prechecks _
+1 :green_heart: dupname 0m 0s No case conflicting files found.
+1 :green_heart: hbaseanti 0m 0s Patch does not have any anti-patterns.
+1 :green_heart: @author 0m 0s The patch does not contain any @author tags.
_ master Compile Tests _
+1 :green_heart: mvninstall 2m 47s master passed
+1 :green_heart: compile 2m 22s master passed
+1 :green_heart: checkstyle 0m 36s master passed
+1 :green_heart: spotbugs 1m 20s master passed
_ Patch Compile Tests _
+1 :green_heart: mvninstall 2m 24s the patch passed
+1 :green_heart: compile 2m 15s the patch passed
+1 :green_heart: javac 2m 15s the patch passed
+1 :green_heart: checkstyle 0m 35s the patch passed
+1 :green_heart: whitespace 0m 0s The patch has no whitespace issues.
+1 :green_heart: hadoopcheck 11m 35s Patch does not cause any errors with Hadoop 3.1.2 3.2.2 3.3.1.
+1 :green_heart: spotbugs 1m 23s the patch passed
_ Other Tests _
+1 :green_heart: asflicense 0m 11s The patch does not generate ASF License warnings.
37m 8s
Subsystem Report/Notes
Docker ClientAPI=1.41 ServerAPI=1.41 base: https://ci-hbase.apache.org/job/HBase-PreCommit-GitHub-PR/job/PR-4206/1/artifact/yetus-general-check/output/Dockerfile
GITHUB PR https://github.com/apache/hbase/pull/4206
Optional Tests dupname asflicense javac spotbugs hadoopcheck hbaseanti checkstyle compile
uname Linux 2d3125b43144 5.4.0-90-generic #101-Ubuntu SMP Fri Oct 15 20:00:55 UTC 2021 x86_64 x86_64 x86_64 GNU/Linux
Build tool maven
Personality dev-support/hbase-personality.sh
git revision master / 71ff3ec323
Default Java AdoptOpenJDK-1.8.0_282-b08
Max. process+thread count 60 (vs. ulimit of 30000)
modules C: hbase-server U: hbase-server
Console output https://ci-hbase.apache.org/job/HBase-PreCommit-GitHub-PR/job/PR-4206/1/console
versions git=2.17.1 maven=3.6.3 spotbugs=4.2.2
Powered by Apache Yetus 0.12.0 https://yetus.apache.org

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Apache-HBase avatar Mar 11 '22 09:03 Apache-HBase

:confetti_ball: +1 overall

Vote Subsystem Runtime Comment
+0 :ok: reexec 1m 35s Docker mode activated.
-0 :warning: yetus 0m 3s Unprocessed flag(s): --brief-report-file --spotbugs-strict-precheck --whitespace-eol-ignore-list --whitespace-tabs-ignore-list --quick-hadoopcheck
_ Prechecks _
_ master Compile Tests _
+1 :green_heart: mvninstall 2m 43s master passed
+1 :green_heart: compile 0m 35s master passed
+1 :green_heart: shadedjars 3m 50s branch has no errors when building our shaded downstream artifacts.
+1 :green_heart: javadoc 0m 23s master passed
_ Patch Compile Tests _
+1 :green_heart: mvninstall 2m 22s the patch passed
+1 :green_heart: compile 0m 34s the patch passed
+1 :green_heart: javac 0m 34s the patch passed
+1 :green_heart: shadedjars 3m 50s patch has no errors when building our shaded downstream artifacts.
+1 :green_heart: javadoc 0m 21s the patch passed
_ Other Tests _
+1 :green_heart: unit 316m 30s hbase-server in the patch passed.
334m 26s
Subsystem Report/Notes
Docker ClientAPI=1.41 ServerAPI=1.41 base: https://ci-hbase.apache.org/job/HBase-PreCommit-GitHub-PR/job/PR-4206/1/artifact/yetus-jdk8-hadoop3-check/output/Dockerfile
GITHUB PR https://github.com/apache/hbase/pull/4206
Optional Tests javac javadoc unit shadedjars compile
uname Linux bba82759156f 5.4.0-1025-aws #25~18.04.1-Ubuntu SMP Fri Sep 11 12:03:04 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux
Build tool maven
Personality dev-support/hbase-personality.sh
git revision master / 71ff3ec323
Default Java AdoptOpenJDK-1.8.0_282-b08
Test Results https://ci-hbase.apache.org/job/HBase-PreCommit-GitHub-PR/job/PR-4206/1/testReport/
Max. process+thread count 3760 (vs. ulimit of 30000)
modules C: hbase-server U: hbase-server
Console output https://ci-hbase.apache.org/job/HBase-PreCommit-GitHub-PR/job/PR-4206/1/console
versions git=2.17.1 maven=3.6.3
Powered by Apache Yetus 0.12.0 https://yetus.apache.org

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Apache-HBase avatar Mar 11 '22 14:03 Apache-HBase

:confetti_ball: +1 overall

Vote Subsystem Runtime Comment
+0 :ok: reexec 2m 19s Docker mode activated.
-0 :warning: yetus 0m 4s Unprocessed flag(s): --brief-report-file --spotbugs-strict-precheck --whitespace-eol-ignore-list --whitespace-tabs-ignore-list --quick-hadoopcheck
_ Prechecks _
_ master Compile Tests _
+1 :green_heart: mvninstall 7m 9s master passed
+1 :green_heart: compile 1m 54s master passed
+1 :green_heart: shadedjars 7m 45s branch has no errors when building our shaded downstream artifacts.
+1 :green_heart: javadoc 1m 6s master passed
_ Patch Compile Tests _
+1 :green_heart: mvninstall 6m 20s the patch passed
+1 :green_heart: compile 1m 39s the patch passed
+1 :green_heart: javac 1m 39s the patch passed
+1 :green_heart: shadedjars 7m 13s patch has no errors when building our shaded downstream artifacts.
+1 :green_heart: javadoc 0m 53s the patch passed
_ Other Tests _
+1 :green_heart: unit 463m 19s hbase-server in the patch passed.
501m 54s
Subsystem Report/Notes
Docker ClientAPI=1.41 ServerAPI=1.41 base: https://ci-hbase.apache.org/job/HBase-PreCommit-GitHub-PR/job/PR-4206/1/artifact/yetus-jdk11-hadoop3-check/output/Dockerfile
GITHUB PR https://github.com/apache/hbase/pull/4206
Optional Tests javac javadoc unit shadedjars compile
uname Linux ee69bdcd2245 5.4.0-90-generic #101-Ubuntu SMP Fri Oct 15 20:00:55 UTC 2021 x86_64 x86_64 x86_64 GNU/Linux
Build tool maven
Personality dev-support/hbase-personality.sh
git revision master / 71ff3ec323
Default Java AdoptOpenJDK-11.0.10+9
Test Results https://ci-hbase.apache.org/job/HBase-PreCommit-GitHub-PR/job/PR-4206/1/testReport/
Max. process+thread count 1832 (vs. ulimit of 30000)
modules C: hbase-server U: hbase-server
Console output https://ci-hbase.apache.org/job/HBase-PreCommit-GitHub-PR/job/PR-4206/1/console
versions git=2.17.1 maven=3.6.3
Powered by Apache Yetus 0.12.0 https://yetus.apache.org

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Apache-HBase avatar Mar 11 '22 17:03 Apache-HBase

So here we can only release all the cells at onceafter shipping them all? Will it cause OOM?

Apache9 avatar Mar 12 '22 15:03 Apache9

Any updates here? @mymeiyi @GeorryHuang

Apache9 avatar Jul 01 '22 14:07 Apache9

So here we can only release all the cells at onceafter shipping them all? Will it cause OOM?

Sorry for so late to reply. This problem is also disscussed in https://github.com/apache/hbase/pull/3318#issuecomment-853523470.

the block release may be delayed. There is a configuration named "hbase.hstore.compaction.kv.max" and default value is 10 to limit scan cell count in compaction. But if a cell size is huge, we can not avoid the delay.

Now this is the most simple way to fix it. We may need to find a better way if we want to release timely.

mymeiyi avatar Jul 07 '22 02:07 mymeiyi

:confetti_ball: +1 overall

Vote Subsystem Runtime Comment
+0 :ok: reexec 1m 11s Docker mode activated.
_ Prechecks _
+1 :green_heart: dupname 0m 0s No case conflicting files found.
+1 :green_heart: hbaseanti 0m 0s Patch does not have any anti-patterns.
+1 :green_heart: @author 0m 0s The patch does not contain any @author tags.
_ master Compile Tests _
+1 :green_heart: mvninstall 2m 30s master passed
+1 :green_heart: compile 2m 18s master passed
+1 :green_heart: checkstyle 0m 32s master passed
+1 :green_heart: spotless 0m 44s branch has no errors when running spotless:check.
+1 :green_heart: spotbugs 1m 20s master passed
_ Patch Compile Tests _
+1 :green_heart: mvninstall 2m 11s the patch passed
+1 :green_heart: compile 2m 16s the patch passed
+1 :green_heart: javac 2m 16s the patch passed
+1 :green_heart: checkstyle 0m 31s the patch passed
+1 :green_heart: whitespace 0m 0s The patch has no whitespace issues.
+1 :green_heart: hadoopcheck 11m 34s Patch does not cause any errors with Hadoop 3.1.2 3.2.2 3.3.1.
+1 :green_heart: spotless 0m 41s patch has no errors when running spotless:check.
+1 :green_heart: spotbugs 1m 24s the patch passed
_ Other Tests _
+1 :green_heart: asflicense 0m 11s The patch does not generate ASF License warnings.
32m 14s
Subsystem Report/Notes
Docker ClientAPI=1.41 ServerAPI=1.41 base: https://ci-hbase.apache.org/job/HBase-PreCommit-GitHub-PR/job/PR-4206/2/artifact/yetus-general-check/output/Dockerfile
GITHUB PR https://github.com/apache/hbase/pull/4206
Optional Tests dupname asflicense javac spotbugs hadoopcheck hbaseanti spotless checkstyle compile
uname Linux 74c61516b1af 5.4.0-90-generic #101-Ubuntu SMP Fri Oct 15 20:00:55 UTC 2021 x86_64 x86_64 x86_64 GNU/Linux
Build tool maven
Personality dev-support/hbase-personality.sh
git revision master / 2197b3806b
Default Java AdoptOpenJDK-1.8.0_282-b08
Max. process+thread count 64 (vs. ulimit of 30000)
modules C: hbase-server U: hbase-server
Console output https://ci-hbase.apache.org/job/HBase-PreCommit-GitHub-PR/job/PR-4206/2/console
versions git=2.17.1 maven=3.6.3 spotbugs=4.2.2
Powered by Apache Yetus 0.12.0 https://yetus.apache.org

This message was automatically generated.

Apache-HBase avatar Jul 08 '22 13:07 Apache-HBase

:confetti_ball: +1 overall

Vote Subsystem Runtime Comment
+0 :ok: reexec 0m 42s Docker mode activated.
-0 :warning: yetus 0m 2s Unprocessed flag(s): --brief-report-file --spotbugs-strict-precheck --whitespace-eol-ignore-list --whitespace-tabs-ignore-list --quick-hadoopcheck
_ Prechecks _
_ master Compile Tests _
+1 :green_heart: mvninstall 2m 21s master passed
+1 :green_heart: compile 0m 33s master passed
+1 :green_heart: shadedjars 3m 53s branch has no errors when building our shaded downstream artifacts.
+1 :green_heart: javadoc 0m 23s master passed
_ Patch Compile Tests _
+1 :green_heart: mvninstall 2m 7s the patch passed
+1 :green_heart: compile 0m 33s the patch passed
+1 :green_heart: javac 0m 33s the patch passed
+1 :green_heart: shadedjars 3m 56s patch has no errors when building our shaded downstream artifacts.
+1 :green_heart: javadoc 0m 21s the patch passed
_ Other Tests _
+1 :green_heart: unit 202m 56s hbase-server in the patch passed.
218m 55s
Subsystem Report/Notes
Docker ClientAPI=1.41 ServerAPI=1.41 base: https://ci-hbase.apache.org/job/HBase-PreCommit-GitHub-PR/job/PR-4206/2/artifact/yetus-jdk8-hadoop3-check/output/Dockerfile
GITHUB PR https://github.com/apache/hbase/pull/4206
Optional Tests javac javadoc unit shadedjars compile
uname Linux 201902bf7b22 5.4.0-1071-aws #76~18.04.1-Ubuntu SMP Mon Mar 28 17:49:57 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux
Build tool maven
Personality dev-support/hbase-personality.sh
git revision master / 2197b3806b
Default Java AdoptOpenJDK-1.8.0_282-b08
Test Results https://ci-hbase.apache.org/job/HBase-PreCommit-GitHub-PR/job/PR-4206/2/testReport/
Max. process+thread count 2158 (vs. ulimit of 30000)
modules C: hbase-server U: hbase-server
Console output https://ci-hbase.apache.org/job/HBase-PreCommit-GitHub-PR/job/PR-4206/2/console
versions git=2.17.1 maven=3.6.3
Powered by Apache Yetus 0.12.0 https://yetus.apache.org

This message was automatically generated.

Apache-HBase avatar Jul 08 '22 16:07 Apache-HBase

:confetti_ball: +1 overall

Vote Subsystem Runtime Comment
+0 :ok: reexec 2m 7s Docker mode activated.
-0 :warning: yetus 0m 3s Unprocessed flag(s): --brief-report-file --spotbugs-strict-precheck --whitespace-eol-ignore-list --whitespace-tabs-ignore-list --quick-hadoopcheck
_ Prechecks _
_ master Compile Tests _
+1 :green_heart: mvninstall 3m 22s master passed
+1 :green_heart: compile 0m 56s master passed
+1 :green_heart: shadedjars 4m 38s branch has no errors when building our shaded downstream artifacts.
+1 :green_heart: javadoc 0m 33s master passed
_ Patch Compile Tests _
+1 :green_heart: mvninstall 3m 10s the patch passed
+1 :green_heart: compile 0m 53s the patch passed
+1 :green_heart: javac 0m 53s the patch passed
+1 :green_heart: shadedjars 4m 28s patch has no errors when building our shaded downstream artifacts.
+1 :green_heart: javadoc 0m 28s the patch passed
_ Other Tests _
+1 :green_heart: unit 226m 27s hbase-server in the patch passed.
248m 39s
Subsystem Report/Notes
Docker ClientAPI=1.41 ServerAPI=1.41 base: https://ci-hbase.apache.org/job/HBase-PreCommit-GitHub-PR/job/PR-4206/2/artifact/yetus-jdk11-hadoop3-check/output/Dockerfile
GITHUB PR https://github.com/apache/hbase/pull/4206
Optional Tests javac javadoc unit shadedjars compile
uname Linux ab938921ed74 5.4.0-1043-aws #45~18.04.1-Ubuntu SMP Fri Apr 9 23:32:25 UTC 2021 x86_64 x86_64 x86_64 GNU/Linux
Build tool maven
Personality dev-support/hbase-personality.sh
git revision master / 2197b3806b
Default Java AdoptOpenJDK-11.0.10+9
Test Results https://ci-hbase.apache.org/job/HBase-PreCommit-GitHub-PR/job/PR-4206/2/testReport/
Max. process+thread count 2626 (vs. ulimit of 30000)
modules C: hbase-server U: hbase-server
Console output https://ci-hbase.apache.org/job/HBase-PreCommit-GitHub-PR/job/PR-4206/2/console
versions git=2.17.1 maven=3.6.3
Powered by Apache Yetus 0.12.0 https://yetus.apache.org

This message was automatically generated.

Apache-HBase avatar Jul 08 '22 16:07 Apache-HBase