Ash O'Farrell
Ash O'Farrell
**Is your feature request related to a problem? Please describe.** Building off of https://github.com/dockstore/dockstore/issues/4766, I'd like to use emdashes/endashes in collection display names. This would help create a bit of...
Addresses https://github.com/nextstrain/auspice/issues/1756 from the matUtils side by providing a (bogus) divergence value when converting to JSON. This makes the resulting JSON align closer to the schema that Auspice expects, and...
The dockerfile pulls ubuntu:20.04 as its base image, which includes 4.7 of `sed`. This version of `sed` has filesystem issues breaks thing when it is running in a Docker image....
When installing via ./install/installMacOS.sh, Homebrew will update open-mpi (if it's already installed) to 5.0.2. However, later down the line installation will fail us the script searches for open-mpi 5.0.0, which...
`matutils extract` can extract samples as specified via a text file via `-s` or `-K`, and in either case the format of the text file is the same. However, there...
This entry is currently not displaying correctly on Dockstore, likely due to the lack of ".wdl" in descriptor file path, resulting in the WDL not being found: * [2.1.1](https://dockstore.org/workflows/github.com/gatk-workflows/gatk4-data-processing/processing-for-variant-discovery-gatk4:2.1.1?tab=files) *...
**Is your feature request related to a problem? Please describe.** [The BDC org](https://dockstore.org/organizations/bdcatalyst) has a lot of collections. _PrediXcan_ comes after _TOPMed Workflows_ which comes before _Cumulus Workflows_. As far...
A WDL can import another WDL over https, usually from raw.github.com. However, these imports aren't recognized properly by WDL DevTools, so any workflow with such an import throws an error...
**Describe the bug** I went to mint a DOI for a workflow and Dockstore said that 1.1.16 already had a snapshot, which I know is a prereq for minting a...
**Is your feature request related to a problem? Please describe.** Our information on Docker alternatives doesn't properly introduce Shifter, and some parts of it might be outdated. **Describe the solution...