André Pedersen

Results 112 comments of André Pedersen

AFAIK MRXS is supported by OpenSlide (see [here](https://openslide.org/formats/mirax/)). But I realized that I had forgotten to add this as an option in the selectFile method. I therefore made a commit...

I can have a workaround quite fast - today even. But in order to properly test the workaround, it would be nice to have a trained model I could use...

Oh, I see. But then, if you have a couple of WSIs in the mrxs format, I could try to setup the pipeline, using the published Epithelium_CD3 model to generate...

Oh, yeah, to do all that we also need to create some type of data sharing agreement, which is annoying. OK, I know that FP can read your mxrs WSIs....

Update: inference never started, due to issue https://github.com/AICAN-Research/FAST-Pathology/issues/24. However, the OpenGL windows was still flickering before inference started, which is not ideal.

Justed tested again with the latest release. Works fine on Win10, but on my Dell XPS which runs Win11 I observe flickering. Now, I also waited until inference started, and...

Great suggestions, @SahPet! Some of these suggestions, there already exists issues for. For 1) see https://github.com/AICAN-Research/FAST-Pathology/issues/33, and 2) see https://github.com/AICAN-Research/FAST-Pathology/issues/35, which I just created an issue for after discussing this...

Some of the points here has been adressed already. Whereas for those that remains, new targeted Issues have been created. Hence, this is now a duplicate. Closing this issue for...

Neither I nor @smistad actively use anaconda, but I will try my best. AFAIK, when you pip install openslide, you install `openslide-python`, which is only the python bindings to openslide....

Any update on the Windows support, @mcafaro ? Would be a great feature, and desperately needed for a project I am involved in.