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DeepCycle.py assumes umap already run on Anndata object

Open adam-cornwell opened this issue 1 year ago • 0 comments

I pre-processed anndata objects as the existing documentation suggested, but then found the script errored when trying to access UMAP embeddings that didn't exist yet. It would be great to add a note about running UMAP on the anndata object first to the docs. Thanks!

adam-cornwell avatar Feb 13 '24 22:02 adam-cornwell