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tensorflow version 2

1

Hi, I just want to ask, can tensorflow version 2.0 be used to run this repo? If not, when will this repo be upgraded into tensorflow version 2.0?

lokeycookie

While trying out the get_patches function defined under CTImagesBatch class, I got an assertion error. `luna_dataset = Dataset(index=luna_index, batch_class=CTImagesBatch) # create a dataset structure preprocessing = (Pipeline() .load(fmt='raw') .normalize_hu(min_hu=-1000, max_hu=400)...

lokeycookie

Hello all! Let’s say that I have succesfully trained a 3D unet model and have saved its weight. Currently in RadIO tutorial 4, in order to predict a CT scan,...

lokeycookie

Hello, I faced a problem in tutorial 3. When I run this code,    The nodule location in the mask does not correspond to any nodules in the...

lokeycookie

Tutorial I: Error in preprocessing pipeline

6

Hi all, @roman-kh @akoryagin I cannot move forward pass tutorial I. The preprocessing pipeline worked when it only has load operation. But, when I chained it with resize operation, I...

ronykalfarisi

TypeError("Can't mix strings and bytes in path components")

2

When I tried loading the dicom images from a kaggle dataset using RadIO it failed Here is the link to the notebook it just has 3 cells https://www.kaggle.com/errohitshende/evaluate-radio The code...

RohitShende

Pipeline will never stop as n_epochs=None

2

Hi guys, I'm following tutorial 4. Everything works just fine till the very end. After preprocessing, i define a Keras 3D U-NET, exactly as in the tutorial. So my code...

ListIndexOutOfRange

I hope to save luna16 data to JPG or PNG format through RadIO, or dump it to image format through batch processing. It's better to save some or all of...

yuchen02


ahmedanwar100

TypeError: only integer scalar arrays can be converted to a scalar index

3

Hi, I'm following the first tutorial (RadIO.I.ipynb) and I always seem to get the same error. I've tryed with different data than from the Luna dataset and I get the...

glescki