tools: scripts: Properly handle assembly files

[CiprianRegus]

Pull Request Description

A couple fixes for the build system.

PR Type

• [ ] Bug fix (change that fixes an issue)
• [ ] New feature (change that adds new functionality)
• [ ] Breaking change (has dependencies in other repos or will cause CI to fail)

PR Checklist

• [ ] I have followed the Coding style guidelines
• [ ] I have performed a self-review of the changes
• [ ] I have commented my code, at least hard-to-understand parts
• [ ] I have build all projects affected by the changes in this PR
• [ ] I have tested in hardware affected projects, at the relevant boards
• [ ] I have signed off all commits from this PR
• [ ] I have updated the documentation (wiki pages, ReadMe etc), if applies