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Published 20 hours ago • verified publisher icon amplab

fixing off by one bug in BAM reader decodeSeqRC

Open sbyma opened this issue 7 years ago • 1 comments

If decodeSeqRC() receives a read with an odd number of bases, the loop will write into position o_sequence[0] instead of leaving it empty for the final if to fill it in. This commit fixes the bug by adjusting o_sequence_pairs to point one byte beyond the start of o_sequence if the read length is odd numbered.

sbyma avatar Jun 15 '17 09:06 sbyma

Can one of the admins verify this patch?

AmplabJenkins avatar Jun 15 '17 09:06 AmplabJenkins