sativa
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How to understand the levels in the result file?
This is a row of my result
;SeqID MislabeledLevel OriginalLabel ProposedLabel Confidence OriginalTaxonomyPath ProposedTaxonomyPath PerRankConfidence
MN952976 Domain Pempheriformes 0.999 Metazoa;Chordata;Actinopteri;;Lactariidae;Lactarius;Lactarius lactarius Metazoa;Chordata;Actinopteri;Pempheriformes 0.999;0.999;0.999;0.999
My question is:
(1)Why the MislabeledLevel is "Domain"?
(2)How to prepare the taxonomic annotations file in -t
correctly? How to do if certain level is missing? Currently I just put an empty string there