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How to prediect with my own train set?

Open NGC2237-wei opened this issue 2 years ago • 3 comments

NGC2237-wei avatar Nov 16 '21 12:11 NGC2237-wei

I'm trying to predient with my own train set using ner model, i create a new train set like provided,but i meet the problem like this.

NGC2237-wei avatar Nov 16 '21 12:11 NGC2237-wei

tensor([[0., -0., -0., ..., -0., -0., 0.], [0., -0., -0., ..., -0., -0., 0.], [0., -0., -0., ..., -0., -0., 0.], ..., [-0., -0., 0., ..., -0., -0., 0.], [0., -0., 0., ..., -0., -0., 0.], [0., -0., 0., ..., -0., -0., 0.]]) predictions.shape torch.Size([416, 63]) gold_labels.shape torch.Size([42412])

42412 is my train set size

NGC2237-wei avatar Nov 16 '21 12:11 NGC2237-wei

The prediction shape is not equal the gold_labels.shape

Traceback (most recent call last): File "/home/anaconda3/envs/scispacy/lib/python3.6/runpy.py", line 193, in _run_module_as_main "main", mod_spec) File "/home/anaconda3/envs/scispacy/lib/python3.6/runpy.py", line 85, in _run_code exec(code, run_globals) File "/home/home/scib/src/allennlp/allennlp/run.py", line 21, in run() File "/home/home/scib/src/allennlp/allennlp/run.py", line 18, in run main(prog="allennlp") File "/home/home/scib/src/allennlp/allennlp/commands/init.py", line 102, in main args.func(args) File "/home/scib/src/allennlp/allennlp/commands/train.py", line 124, in train_model_from_args args.cache_prefix) File "/home/home//scib/src/allennlp/allennlp/commands/train.py", line 168, in train_model_from_file cache_directory, cache_prefix) File "/home//homescib/src/allennlp/allennlp/commands/train.py", line 252, in train_model metrics = trainer.train() File "/home//hom/scib/src/allennlp/allennlp/training/trainer.py", line 552, in train val_loss, num_batches = self._validation_loss() File "/home//home//scib/src/allennlp/allennlp/training/trainer.py", line 489, in _validation_loss loss = self.batch_loss(batch_group, for_training=False) File "/home//home//scib/src/allennlp/allennlp/training/trainer.py", line 279, in batch_loss output_dict = self.model(**batch) File "/home//anaconda3/envs/scispacy/lib/python3.6/site-packages/torch/nn/modules/module.py", line 722, in _call_impl result = self.forward(*input, **kwargs) File "/home/home//scib/src/allennlp/allennlp/models/crf_tagger.py", line 220, in forward metric(class_probabilities, tags, mask.float()) File "/home//home//scib/src/allennlp/allennlp/training/metrics/categorical_accuracy.py", line 74, in call correct = top_k.eq(gold_labels.unsqueeze(-1)).float() RuntimeError: The size of tensor a (416) must match the size of tensor b (42412) at non-singleton dimension 0

NGC2237-wei avatar Nov 16 '21 12:11 NGC2237-wei