Robert Allaway

Add MetaPhlAn 3.0 module

1

### Description of feature Last summer, @parnaljoshi came up with the idea of using MetaPhlAn to look for viral reads in tumor data. The general approach was: - align tumor...

### Description of feature This is a placeholder suggestion at the moment - I haven't had a chance to actually try out this tool but came across this alignment-free method...

**Is your feature request related to a problem? Please describe.** I'm running into an issue where I can run a shiny app (https://github.com/Sage-Bionetworks/polypharmacology-db) locally and on a Shiny Server with...

Hi @ckandoth , I needed to be able to run the AlphaMissense VEP plugin in vcf2maf, so I made a couple of small modifications to enable vcf2maf users to pass...