alisman
alisman
- [ ] SV table in patient view - [ ] SV table in results view (if we break it out) - [ ] Oncoprint
Make a bookmarklet to open the same query on beta portal: javascript:(function()%7Bwindow.open(window.location.href.replace(window.location.hostname%2C window.location.hostname.includes("sv") %3F "www.cbioportal.org" %3A "beta.cbioportal.org" ))%7D)()%3B
(Number 1 in Tali's list) I think it'd be clearer & more consistent with other profiles to call the profile 'Structural Variants' rather than 'SV Data' 
The following url show oncogic annotattions for SV events whereaes new SV implementation does not https://www.cbioportal.org/results/mutations?cancer_study_list=blca_nmibc_2017&Z_SCORE_THRESHOLD=2.0&RPPA_SCORE_THRESHOLD=2.0&profileFilter=fusion&case_set_id=blca_nmibc_2017_cnaseq&gene_list=FGFR3%250ATACC3&geneset_list=%20&tab_index=tab_visualize&Action=Submit&comparison_subtab=alterations&comparison_selectedEnrichmentEventTypes=%5B%22structural_variant%22%5D&mutations_gene=TACC3
Following curl responds empty. Which is what [explains](https://beta.cbioportal.org/patient?studyId=coadread_tcga_pan_can_atlas_2018&caseId=TCGA-F5-6864) curl 'https://beta.cbioportal.org/api/structural-variant/fetch' \ -H 'authority: beta.cbioportal.org' \ -H 'accept: application/json' \ -H 'accept-language: en-US,en;q=0.9' \ -H 'content-type: application/json' \ -H 'cookie: _ga=GA1.2.1629202144.1632427001;...
If we were to track cBioPortal UI state in URL, we would get very long, unwieldy urls that would be difficult to share. If we try to store them in...
This PR switches from using the mainTabs style inside of drop downs to using a new, menu style. This makes it possible to fix some alignment issues. Old:  New:...
Fix cBioPortal/cbioportal# (see https://help.github.com/en/articles/closing-issues-using-keywords) Describe changes proposed in this pull request: - a - b ## Checks - [ ] Has tests or has a separate issue that describes the...