NIfTI-Image-Converter

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Incorrect scale after image convert

1

The output image dimension for coronal and sagittal (x and y axis) were all squeezed to incorrect shape. In my case, the 512x512 image becomes 512x120. Is there any way...

toby-cnr

convert nii.gz to png black image.png

5

thank you for the code When I convert the images, I get a black image.png. I have no idea why i am getting a black picture. Can anyone help me?...

hannamraha

how to implement nii_to_pngs_converter for .nii zipped files @monjoybme

4

bmd143

how to use nii_to_png_converter.py

4

Hi, First of all thanks for writing such awesome code for helping others. Now let's come to my problem. I was trying to use your code for my research. I...

shabbirshuvo

Error running code.

2

I am working in Google colaboratory I installed using pip install nii2png command, i was able to do it successfully. then i ran $ python3 nii2png.py -i /content/MICCAI_BraTS_2019_Data_Training/HGG/BraTS19_2013_10_1/BraTS19_2013_10_1_flair.nii -o /content/output_nifti_png/...

hitesh0103

monjoybme

Matlab Error

2

Hi there! I noticed in your nii2png matlab program there was an error on line 173. You forgot to change the increment name from i to current_slice causing it to...

Shiroifuyuki

Support for 2D nifti files?

2

Hello, I was trying to use that script for an output image of ANTS. My nifti file is 2D (only has 1 slice). Maybe one can add this functionallty Thank...

andife

can i change .nii to RGB images(images with 3 channels) using nii2png

1

hi am using the matlab code and i want to get images with 3 channels (RGB images) instead of grayscale images, how should i change the code to do this...

Rimehdaoudi

Shutil error while installing

5

I am trying to install it using admin and facing following problem ! Collecting shutil (from nii2png) Could not find a version that satisfies the requirement shutil (from nii2png) (from...

Usama323