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Published 20 hours ago • verified publisher icon alekseyzimin

Cannot locate the output file after running the Samba

Open Oieswarya opened this issue 1 year ago • 0 comments

I am running samba with this command : ./samba.sh -r minia_eColi_SR.contigs.fa -q EC_hifi.fa -d asm -t 8

The output log is: [Tue Apr 25 15:36:03 PDT 2023] Output scaffold sequences in minia_eColi_SR.contigs.fa.scaffolds.fa

But I cannot locate this file. It is not in the current directory. Is there way I can specify the output directory?

Oieswarya avatar Apr 25 '23 22:04 Oieswarya