mindcontrol
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akeshavan
MindControl is an app for quality control of neuroimaging pipeline outputs. Demo:
I am running the meteor app with default settings and opening T1w images to edit. I can log points, and generate "curve" objects with the green plus sign in the...
I have tried the demo on http://mindcontrol.herokuapp.com/freesurfer/sub86516-sub86516-000-MPRAGE. It can draw curves when loading default data. When I load local data, it can display the image normally, but can't draw curves...
Still testing and cleaning up
Having the next image button closer to the save button, (or even a save and next as a single button) would make it quicker to work through a dataset.
If I'm qcing a subjects surface and whitematter, I might want to see if the problem originated in the brainmask. It'd be nice to have a link to the other...
I'm trying to run mindcontrol on a HPC cluster supporting Singularity. Has anyone made a singularity container for mindcontrol?
This changes auto_mindcontrol.py to use `os.path.relpath` instead of string substitution to calculate the relative paths to data files from the bids folder, which had been occasionally causing a problem for...
Hi, I fellow all the installation guide, but when run meteor I have this error in attach [METEOR_error.txt](https://github.com/akeshavan/mindcontrol/files/1614946/METEOR_error.txt) thanks Piero
When adding new logged points, the resulting point does not match the location where the user clicked. I can observe several issues that are causing this, which may be separate...
The confidence level seems to be set to a random value upon saving, this seems like odd behavior https://github.com/akeshavan/mindcontrol/blob/741dd720b2d09f29a9186b7ddc9be2c9ef40c213/imports/ui/qc.js#L1010-L1013
