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How to train DeepEventMine on my own dataset?

Open YaoXinZhi opened this issue 1 year ago • 2 comments

Hi Alistair.

Thank you for your exciting work on the BioEE task.

I was wondering if DeepEventMine could be easily trained on my own dataset and used for the annotation of new text.

Because I noticed that "event structures files" are not easy to prepare.

Just like mentioned in the 'run/prepare-cg.sh'

`

  1. EVENT STRUCTURES echo "-----------------------------" echo "3. Download processed event structures"

Our processed event structures data FILEID=1qzjY38RdnCvomVAD3XMk_J4pi1gIraA5

gdown https://drive.google.com/uc?id=$FILEID tar -xzvf cg.tar.gz rm *.tar.gz

`

Do you have any suggestions for the preparation of this file?

You may have heard about Active gene annotation corpus (AGAC), a biological event annotation corpus developed in recent years, and we would like to use DeepEventMine for AGAC training and annotation.

Looking forward to your reply!

best wish, xinzhi.

YaoXinZhi avatar May 10 '23 13:05 YaoXinZhi

I have a same problem, did you solve any problem?

foodaiproject avatar Jun 14 '23 07:06 foodaiproject

Please use this code in the branch "train" to train the model https://github.com/aistairc/DeepEventMine/tree/train

trieuhl avatar Sep 29 '23 03:09 trieuhl