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AIRR Community Data Standards

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When using `airr.read_rearrangement` on a gzip file, get this error ``` Traceback (most recent call last): File "", line 1, in File "/usr/local/lib/python3.8/dist-packages/airr/io.py", line 89, in __next__ row = next(self.dict_reader)...

Python library

Both of the AIRR schema spec files say "1.4" when should be "1.5". Because the master branch has already moved significantly towards 2.0, I've created a `release-1.5` branch starting from...

Replaces #748 Closes #578 So far: just some docs updates...

A couple of questions that came up in an iReceptor Plus meeting today: - From an ADC perspective, repertoire_ids are typically unique within a given context (in the ADC they...

Repertoire grouping

Moving discussion of linking AIRR objects of known epitope/antigen reactivity/specificity to this issue and out of #776

reactivity

Draft of updates to `Clone`. Closes: #201 (incidentally) #317 #333 #378 #769 Open questions, both related to the switch from `Repertoire` to `RepertoireGroup`: - [x] Do we need a more...

There are internal JavaScript errors on the main page (Uncaught TypeError) and on v: latest (GET error). The specific pages are as follows: https://docs.airr-community.org/en/stable/api/adc.html https://docs.airr-community.org/en/latest/api/adc.html

build/test

- [ ] finish I/O routines - [x] add tests - [x] API documentation? - [ ] npm account, publish, update release procedures - [ ] consolidate test/data into common...

Start building the base so we only need to edit the OpenAPI v3 spec, and the v2 spec can be generated from v3. Also clean up the test suites so...