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Load Basic Annotations

Open nchernia opened this issue 7 years ago • 5 comments

When I open the Annotation Panel and click "Load Basic Annotations", it pops under (and sometimes in such a way that I don't see it at all). It makes it seem as though the application is stuck.

Screenshot:

image

nchernia avatar Feb 28 '18 19:02 nchernia

No, this is still not fixed. It is reproduced in the .app but not in the IntelliJ version (similar to another problem we were having with minimization so maybe this is a threading issue?)

nchernia avatar Mar 17 '18 21:03 nchernia

Hmm :/ in that case I'm not sure how it can be resolved. We can't make the 2d annotations panel a jframe because jframes can't have parents and 2d annotation panel must be a child of mainwindow. Only jframes can be parents for new dialogs, which for us is mainwindow. Not really sure if there's a straightforward solution.

Does this only happen with load basic annotations or any other buttons as well? Maybe having the glasspane triggers this somehow.

sa501428 avatar Mar 17 '18 21:03 sa501428

Note that this only happens with "Load 1D Annotations". It does not happen with 2D, with ENCODE, with loading local, etc.

On Sat, Mar 17, 2018 at 5:31 PM, Muhammad Saad Shamim < [email protected]> wrote:

Hmm :/ in that case I'm not sure how it can be resolved. We can't make the 2d annotations panel a jframe because jframes can't have parents and 2d annotation panel must be a child of mainwindow. Only jframes can be parents for new dialogs, which for us is mainwindow. Not really sure if there's a straightforward solution.

Does this only happen with load basic annotations or any other buttons as well? Maybe having the glasspane triggers this somehow.

— You are receiving this because you modified the open/close state. Reply to this email directly, view it on GitHub https://github.com/theaidenlab/Juicebox/issues/723#issuecomment-373954126, or mute the thread https://github.com/notifications/unsubscribe-auth/ABWiW17iuQX27uGQrmEbjgqmrsmT1X2rks5tfYDAgaJpZM4SXPfe .

-- Neva Cherniavsky Durand, Ph.D. Staff Scientist, Aiden Lab www.aidenlab.org

nchernia avatar Mar 17 '18 21:03 nchernia

Does it happen with load from url?

On Sat, Mar 17, 2018 at 4:34 PM, nchernia [email protected] wrote:

Note that this only happens with "Load 1D Annotations". It does not happen with 2D, with ENCODE, with loading local, etc.

On Sat, Mar 17, 2018 at 5:31 PM, Muhammad Saad Shamim < [email protected]> wrote:

Hmm :/ in that case I'm not sure how it can be resolved. We can't make the 2d annotations panel a jframe because jframes can't have parents and 2d annotation panel must be a child of mainwindow. Only jframes can be parents for new dialogs, which for us is mainwindow. Not really sure if there's a straightforward solution.

Does this only happen with load basic annotations or any other buttons as well? Maybe having the glasspane triggers this somehow.

— You are receiving this because you modified the open/close state. Reply to this email directly, view it on GitHub <https://github.com/theaidenlab/Juicebox/issues/ 723#issuecomment-373954126>, or mute the thread <https://github.com/notifications/unsubscribe-auth/ ABWiW17iuQX27uGQrmEbjgqmrsmT1X2rks5tfYDAgaJpZM4SXPfe> .

-- Neva Cherniavsky Durand, Ph.D. Staff Scientist, Aiden Lab www.aidenlab.org

— You are receiving this because you modified the open/close state. Reply to this email directly, view it on GitHub https://github.com/theaidenlab/Juicebox/issues/723#issuecomment-373954254, or mute the thread https://github.com/notifications/unsubscribe-auth/AGM9bUl8tgsrKKmOvvz8j1OGwsSEfrgRks5tfYFVgaJpZM4SXPfe .

sa501428 avatar Mar 17 '18 21:03 sa501428

No

On Sat, Mar 17, 2018 at 5:36 PM, Muhammad Saad Shamim < [email protected]> wrote:

Does it happen with load from url?

On Sat, Mar 17, 2018 at 4:34 PM, nchernia [email protected] wrote:

Note that this only happens with "Load 1D Annotations". It does not happen with 2D, with ENCODE, with loading local, etc.

On Sat, Mar 17, 2018 at 5:31 PM, Muhammad Saad Shamim < [email protected]> wrote:

Hmm :/ in that case I'm not sure how it can be resolved. We can't make the 2d annotations panel a jframe because jframes can't have parents and 2d annotation panel must be a child of mainwindow. Only jframes can be parents for new dialogs, which for us is mainwindow. Not really sure if there's a straightforward solution.

Does this only happen with load basic annotations or any other buttons as well? Maybe having the glasspane triggers this somehow.

— You are receiving this because you modified the open/close state. Reply to this email directly, view it on GitHub <https://github.com/theaidenlab/Juicebox/issues/ 723#issuecomment-373954126>, or mute the thread <https://github.com/notifications/unsubscribe-auth/ ABWiW17iuQX27uGQrmEbjgqmrsmT1X2rks5tfYDAgaJpZM4SXPfe> .

-- Neva Cherniavsky Durand, Ph.D. Staff Scientist, Aiden Lab www.aidenlab.org

— You are receiving this because you modified the open/close state. Reply to this email directly, view it on GitHub <https://github.com/theaidenlab/Juicebox/issues/ 723#issuecomment-373954254>, or mute the thread <https://github.com/notifications/unsubscribe-auth/ AGM9bUl8tgsrKKmOvvz8j1OGwsSEfrgRks5tfYFVgaJpZM4SXPfe> .

— You are receiving this because you modified the open/close state. Reply to this email directly, view it on GitHub https://github.com/theaidenlab/Juicebox/issues/723#issuecomment-373954445, or mute the thread https://github.com/notifications/unsubscribe-auth/ABWiWz75WDCLPngeguBNbHpLQjBSCVMsks5tfYH3gaJpZM4SXPfe .

-- Neva Cherniavsky Durand, Ph.D. Staff Scientist, Aiden Lab www.aidenlab.org

nchernia avatar Mar 17 '18 21:03 nchernia