BioformatsLoader.jl
BioformatsLoader.jl copied to clipboard
ahnlabb
A julia package to load images using bioformats
Just noticed that I did this a while ago and never got around to open a PR. The code has changed since then, so maybe some of these changes are...
When the build process has failed and `bioformats_package.jar` is unavailable (e.g. download failure) the user gets cryptic error messages when calling functions in the package (#5). The risk of this...
- [ ] Test with open formats using `Images.jl` - [ ] Test with small sample images of different proprietary formats. (Maybe some sample images from the loci website could...
If metadata is present as a filed called "metadata.txt", it is somehow read and this seems to cause a crash preventing any data to read. Here is an example metadata.txt...
I just ran into some trouble loading a file stored in a quite recent Zeiss .czi format. This caused some access error inside the `bioformat_package.jar`. Some investigate showed, that this...