Gordon Robertson

On the chance that the error could be resolved by updating activerecord, I just did this and still see the error: undefined method `more_results' for # /usr/local/lib/ruby/gems/1.8/gems/activerecord-3.0.9/lib/active_record/connection_adapters/mysql_adapter.rb:279:in`select_rows' /usr/local/lib/ruby/gems/1.8/gems/activerecord-3.0.9/lib/active_record/connection_adapters/abstract/database_statements.rb:27:in `select_values' /usr/local/lib/ruby/gems/1.8/gems/ruby-ensembl-api-1.0.1/lib/ensembl/db_connection.rb:62:in`get_name_from_db'...

Thanks, Jan When I run the script, I get the following. undefined method `more_results' for # /usr/local/lib/ruby/gems/1.8/gems/activerecord-3.0.9/lib/active_record/connection_adapters/mysql_adapter.rb:637:in`select' /usr/local/lib/ruby/gems/1.8/gems/activerecord-3.0.9/lib/active_record/connection_adapters/abstract/database_statements.rb:7:in `select_all' /usr/local/lib/ruby/gems/1.8/gems/activerecord-3.0.9/lib/active_record/connection_adapters/abstract/query_cache.rb:56:in`select_all' /usr/local/lib/ruby/gems/1.8/gems/activerecord-3.0.9/lib/active_record/base.rb:473:in `find_by_sql' /usr/local/lib/ruby/gems/1.8/gems/activerecord-3.0.9/lib/active_record/relation.rb:64:in`to_a' /usr/local/lib/ruby/gems/1.8/gems/activerecord-3.0.9/lib/active_record/relation/finder_methods.rb:143:in `all' /usr/local/lib/ruby/gems/1.8/gems/activerecord-3.0.9/lib/active_record/base.rb:444:in`**send**' /usr/local/lib/ruby/gems/1.8/gems/activerecord-3.0.9/lib/active_record/base.rb:444:in `all' /Users/grobertson/GENEREG/WORK/svn/GSC_PERSONAL/ENSEMBL/test_ensembl_api.20110718.rb:16 /usr/local/lib/ruby/gems/1.8/gems/activerecord-3.0.9/lib/active_record/connection_adapters/mysql_adapter.rb:637:in`select':...

There may be a problem in my Ruby MySQL adapter. I'll look into this today and will get back to you.

Jan I upgraded to OSX 10.7 (Lion), then went back over Ruby and MySQL installs, following web advice and deleting a couple of years of old installations of both (e.g....

In the above comment, I'd cut out most of the ~145-line output written by your test script, but what I removed has been reformatted by the Wiki so that it's...