adrienchaton
adrienchaton
@oliverfleetwood did you make any progress? @Zymrael I am not sure what is this issue but my guess could be that some version mismatch may currently lead to it ......
@juliocesar-io thanks a lot, this fixed my issue!!! FYI, additionally I needed to manually copy the evo/configs/*.yml into my python package for evo Following on this, I have a couple...
Hi @matthewdouglas thanks a lot for your quick help! I was skipping the ```quantization_config``` to keep the code snippet as simple as possible but the issue was the same. Now...
Hi @SunMarc @matthewdouglas and thanks a lot for looking into this. Working with a custom HF model which doesnt implement all methods and conventions that bitsandbytes expects is indeed making...
@sokrypton trying my luck ... any chance one of you have a conversion script for ProteinMPNN checkpoints from the official PyTorch repo to JAX for using in your (great) ColabDesign...
@sokrypton thanks a lot, I will run that and upload the weights. I didn't see this script as I was digging https://github.com/sokrypton/ColabDesign/tree/main/colabdesign/mpnn But in the meantime I was figuring out...
@sokrypton thanks for clarifying, I didn't check the commit history but was surprised I hadn't seen that before asking. The script worked flawlessly and the checkpoint is running correctly, I...
Hi @sokrypton sorry for the delayed answer, sounds good! FYI the fine-tuned pt weights are shared here https://zenodo.org/records/8164693 under the Creative Commons Attribution 4.0 license. Original MPNN codes and models...
In case that's helpful to anyone, for now the converted checkpoint is here! Feel free to bring it to the repo however you wish to or to let me know...
in case someone is interested in running some "high thermostability" MPNN model in ColabDesign https://github.com/meilerlab/HyperMPNN/issues/1#issuecomment-2545800754