Adam Coffman

icon indicating a website link adamcoffman.dev icon indicating an email [email protected]

icon company Washington University icon location St. Louis icon location Developer @genome, @griffithlab, @wustl-oncology.

Results 55 comments of Adam Coffman

Listed Variant ClinVar IDs return 404

Interesting find! The ClinVar ids are a manually curated field and it appears that the two now returning 404 were added in 2019: ![Image](https://github.com/user-attachments/assets/3fdc920a-62eb-4ed3-bf52-a8766cb1ef1e) So, they presumably existed at one...

Listed Variant ClinVar IDs return 404

It looks like we link to the following ClinVar IDs which no longer exist: ``` 376090 376340 376137 375939 376069 376288 375880 375879 375883 376282 376280 375991 375992 375990 376205...

Fusion Variants Missing from VariantSummaries tsv

Hi, Thanks so much for your detailed report! This past month we rolled out a more formalized fusion variant model. This resulted in some incompatibilities with the existing TSV format...

Fusion Variants Missing from VariantSummaries tsv

Hi @rob-fisher, the fix has been merged and will go out in our next deploy. This will likely be today or tomorrow, I will follow up on this issue when...

Fusion Variants Missing from VariantSummaries tsv

These changes have been deployed and I have triggered a rebuild of the nightly TSVs, so the updated format that includes Fusion and Factor variants should now be available. Please...