stringdecomposer

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[Error Report] terminate called after throwing an instance of 'std::length_error' what(): basic_string::_M_create

1

We used stringdecomposer to transform DNA sequence into block. Most sequence can work well, but one of DNA sequence failed. The error report is here. The length of DNA sequence...

865699871

non-monomeric regions in centromeres

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Hi, I found that the softeare could identifies non-monomeric regions in centromeres from CentromereArchitect paper. But i didn't find the "CenromereDecomposer" module. I put cento sequence and a gene sequence...

prometheusloong

program keeps running，no new files

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Hi, I tried to use monomer_inference in rice (2Mb sequence in centromere), the script keep running 4 days, but didn't generate new files 2 days ago. Is it right? And...

prometheusloong

Question about +/- in final_decomposition.tsv

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In the study of Altemose et al. (Complete genomic and epigenetic maps of human centromeres), CHM13 Cen1 contains 1.7Mb inversion inside active α HOR array (Fig 2a). We used Stringdecomposer...

865699871

SD--tsv

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Dear author I'd like to ask you,I run through your code ,generates 3 tsv suffix files,as follow:  I'd like to ask which file I should mainly look at. What...

duhuipeng