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Segmentation fault when running meta Spades

Open juanu opened this issue 5 years ago • 1 comments

Hi!

I'm running in an issue with some metagenomics assemblies, where I'm getting the assembly ending due to a segmentation fault error. This only happens with certain datasets, even coming from the same sequencing runs, and does not appear to be related to number of reads in the dataset.

params.txt spades.log

Thanks!

juanu avatar Jul 06 '19 14:07 juanu

Does the problem reproduce if you'd restart failed SPAdes job? If you'd change the # of threads used?

asl avatar Aug 28 '19 09:08 asl