Parameters for the quantification step

[hyeon9]

Hi IsoQuant team,

Thank you for developing this nice tool! I'm wondering if there is a way to consider only FSM reads in the quantification step, because, I found that many mono_exonic reads were included in the count.tsv

Best, Hyeongu

[andrewprzh]

iDear @hyeon9

Thanks for the feedback!

Yes, this feature is on my TODO list. I hope I'll be able to make some more time for IsoQuant maintenance in the nearest future and include this functionality in the next release.

Best Andrey