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Visualize.py?

Open ccmeth opened this issue 6 months ago • 8 comments

Hi, developers,

Thanks a lot for providing such a powerful tool for us to analyze ONT data. I installed isoquant with version 3.4.2 by means of "conda create -c conda-forge -c bioconda -n isoquant python=3.8 isoquant". Today, I noticed that visualize.py could be utilized to interpret data, however, I did not found it in 3.4.2 environment and thus directly downloaded it from github. Unfortunately, I ran an issue in installing src module via "pip install src": AttributeError: 'NoneType' object has no attribute 'has_pure_modules'

By the way, I guessed that visualize.py may be an update introduced in the latest version in v3.5.0, therefore I wondered whether reinstall isoquant with 3.5.0 will address this issue?

ccmeth avatar Aug 05 '24 08:08 ccmeth