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read_bam shouldn't require BAM index

Open shenker opened this issue 5 months ago • 0 comments

It would be great if read_bam worked without a BAM index (provided you're not doing a region query). My use case: Oxford Nanopore's Dorado basecaller outputs basecalled reads in BAM format (where all the alignment fields are null in the BAM), so I want to read them, but there's no point in indexing them.

shenker avatar Jan 17 '24 13:01 shenker